G2130805


Basic Information

Item Value
gene id G2130805
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 33906074 ~ 33906720 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2436374
tcccacctcagctgtagatctctgcagttcatccagagtgatcatgggcctcttggctgcatctctgatcagtcttctccttgtatgagctgaaagtttagagggacggccaggtcttggtagatttgcagtggtctgatactccttccatttcaatattattgcttgcacagtgctccttgggatgtttaaagcttgggaaatctttttgtatccaaatccggctttaaacttcttcacaacagtatctcggacctgcctggtgtgttccttgttcttcatgatgctctctgcgcttttaacggacctctgagactatcacagtgcaggtgcatttatacagagacttgattgcacacaggtggattgtatttatcatcattagtcatttaggtcaacattggatcattcagagatcctcactgaacttctggagagagtttgctgcactgaaagtaaaggggctgaataattttgcacgcccaatttttcagtttttgatttgttaaaaaagtttgaaatatccaataaatgtcgttccacttcatgattgtgtcccacttgttgttgattcttcacaaaaaatacagttttatatctttatgtttaaagcctgaaatgtggcaaaaggtcgcaaagttcaaggg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2436374 True 647 lncRNA 0.41 1 33906074 33906720

Neighbor

gene id symbol gene type direction distance location
LOC110508229 LOC106598404 coding downstream 108788 33626451 ~ 33797286 (-)
trnav-cac-89 NA coding downstream 323442 33582560 ~ 33582632 (-)
LOC110509038 LOC106598425 coding downstream 330083 33572110 ~ 33575991 (-)
LOC110508228 NA coding downstream 337471 33563935 ~ 33568603 (-)
LOC110509037 LOC106598611 coding downstream 343934 33555017 ~ 33562140 (-)
LOC118944832 LOC106598084 coding upstream 7630 33914350 ~ 33916205 (-)
LOC110509043 LOC106598366 coding upstream 46977 33953697 ~ 33972737 (-)
LOC110509045 LOC106598354 coding upstream 70856 33977576 ~ 33990790 (-)
LOC110509046 LOC106598598 coding upstream 90371 33997091 ~ 34000856 (-)
LOC110509052 LOC106598333 coding upstream 132068 34038788 ~ 34058344 (-)
G2130789 NA non-coding downstream 30067 33875759 ~ 33876007 (-)
G2130787 NA non-coding downstream 31574 33874192 ~ 33874500 (-)
G2130642 NA non-coding downstream 55787 33849858 ~ 33850287 (-)
G2130596 NA non-coding downstream 114398 33791405 ~ 33791676 (-)
G2130593 NA non-coding downstream 118128 33787731 ~ 33787946 (-)
G2130806 NA non-coding upstream 520 33907240 ~ 33907582 (-)
G2130847 NA non-coding upstream 99886 34006606 ~ 34006952 (-)
G2130852 NA non-coding upstream 108104 34014824 ~ 34015681 (-)
G2130854 NA non-coding upstream 109578 34016298 ~ 34016990 (-)
G2130855 NA non-coding upstream 112475 34019195 ~ 34019432 (-)
G2130393 NA other downstream 506990 33398547 ~ 33399084 (-)
LOC110508997 NA other downstream 1675860 32228406 ~ 32230258 (-)
asip2b agrp2 other downstream 1741052 32062049 ~ 32187519 (-)
LOC110508982 NA other downstream 1877516 32023057 ~ 32029225 (-)
G2128568 NA other downstream 2022934 31882715 ~ 31883140 (-)
G2130771 LOC106598333 other upstream 133486 34040206 ~ 34066665 (-)
G2130780 LOC106598333 other upstream 134718 34041438 ~ 34068073 (-)
G2131621 NA other upstream 579149 34485869 ~ 34486176 (-)
G2131641 NA other upstream 609802 34516522 ~ 34518129 (-)

Expression


Co-expression Network