Gene
RNA
| Item | Value |
|---|---|
| gene id | G2130704 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 33962234 ~ 33962457 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2436247 | True | 176 | lncRNA | 0.42 | 2 | 33962234 | 33962457 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509044 | LOC106598377 | coding | upstream | 24207 | 33928219 ~ 33938027 (+) |
| cfap57 | LOC106598390 | coding | upstream | 111804 | 33811613 ~ 33850430 (+) |
| LOC110508288 | LOC106598607 | coding | upstream | 151437 | 33808020 ~ 33810797 (+) |
| LOC110509039 | LOC106598420 | coding | upstream | 346195 | 33583098 ~ 33616039 (+) |
| LOC118944849 | NA | coding | upstream | 402682 | 33558282 ~ 33559552 (+) |
| LOC110509047 | LOC106598344 | coding | downstream | 51438 | 34013895 ~ 34018374 (+) |
| LOC110509049 | LOC106598340 | coding | downstream | 67385 | 34029842 ~ 34035930 (+) |
| LOC110509059 | LOC106598314 | coding | downstream | 165173 | 34127630 ~ 34173167 (+) |
| LOC110509053 | LOC106598276 | coding | downstream | 289467 | 34251924 ~ 34257831 (+) |
| extl2 | extl2 | coding | downstream | 306599 | 34269056 ~ 34278701 (+) |
| G2130695 | NA | non-coding | upstream | 16583 | 33945451 ~ 33945651 (+) |
| G2130676 | NA | non-coding | upstream | 52484 | 33909451 ~ 33909750 (+) |
| G2130668 | NA | non-coding | upstream | 63525 | 33898379 ~ 33898709 (+) |
| G2130666 | NA | non-coding | upstream | 66954 | 33894840 ~ 33895280 (+) |
| G2130665 | NA | non-coding | upstream | 67480 | 33894426 ~ 33894754 (+) |
| G2130725 | NA | non-coding | downstream | 37354 | 33999811 ~ 34000524 (+) |
| G2130727 | NA | non-coding | downstream | 41379 | 34003836 ~ 34004045 (+) |
| G2130730 | NA | non-coding | downstream | 44353 | 34006810 ~ 34007503 (+) |
| G2130749 | LOC106598333 | non-coding | downstream | 78691 | 34038792 ~ 34069094 (+) |
| G2129859 | NA | other | upstream | 232706 | 33729148 ~ 33729528 (+) |
| G2129765 | LOC106598425 | other | upstream | 386264 | 33572108 ~ 33575970 (+) |
| G2129724 | LOC106598452 | other | upstream | 509361 | 33452212 ~ 33452873 (+) |
| G2129708 | NA | other | upstream | 530127 | 33431751 ~ 33432107 (+) |
| G2129639 | LOC106598496 | other | upstream | 653243 | 33308098 ~ 33308991 (+) |
| G2130731 | NA | other | downstream | 45174 | 34007631 ~ 34008262 (+) |
| LOC110508236 | LOC106598267 | other | downstream | 408404 | 34352592 ~ 34409491 (+) |
| G2131383 | NA | other | downstream | 641028 | 34603485 ~ 34604953 (+) |
| G2131416 | NA | other | downstream | 724814 | 34687271 ~ 34687640 (+) |
