Gene
RNA
| Item | Value |
|---|---|
| gene id | G2130730 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 34006810 ~ 34007503 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2436281 | True | 694 | lncRNA | 0.49 | 1 | 34006810 | 34007503 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509044 | LOC106598377 | coding | upstream | 68783 | 33928219 ~ 33938027 (+) |
| cfap57 | LOC106598390 | coding | upstream | 156380 | 33811613 ~ 33850430 (+) |
| LOC110508288 | LOC106598607 | coding | upstream | 196013 | 33808020 ~ 33810797 (+) |
| LOC110509039 | LOC106598420 | coding | upstream | 390771 | 33583098 ~ 33616039 (+) |
| LOC118944849 | NA | coding | upstream | 447258 | 33558282 ~ 33559552 (+) |
| LOC110509047 | LOC106598344 | coding | downstream | 6392 | 34013895 ~ 34018374 (+) |
| LOC110509049 | LOC106598340 | coding | downstream | 22339 | 34029842 ~ 34035930 (+) |
| LOC110509059 | LOC106598314 | coding | downstream | 120127 | 34127630 ~ 34173167 (+) |
| LOC110509053 | LOC106598276 | coding | downstream | 244421 | 34251924 ~ 34257831 (+) |
| extl2 | extl2 | coding | downstream | 261553 | 34269056 ~ 34278701 (+) |
| G2130727 | NA | non-coding | upstream | 2765 | 34003836 ~ 34004045 (+) |
| G2130725 | NA | non-coding | upstream | 6286 | 33999811 ~ 34000524 (+) |
| G2130689 | NA | non-coding | upstream | 13145 | 33953703 ~ 33993665 (+) |
| G2130704 | NA | non-coding | upstream | 44353 | 33962234 ~ 33962457 (+) |
| G2130695 | NA | non-coding | upstream | 61159 | 33945451 ~ 33945651 (+) |
| G2130749 | LOC106598333 | non-coding | downstream | 33645 | 34038792 ~ 34069094 (+) |
| G2130750 | NA | non-coding | downstream | 36960 | 34044463 ~ 34071017 (+) |
| G2130881 | NA | non-coding | downstream | 71040 | 34078543 ~ 34078949 (+) |
| G2130882 | NA | non-coding | downstream | 71624 | 34079127 ~ 34082298 (+) |
| G2129859 | NA | other | upstream | 277282 | 33729148 ~ 33729528 (+) |
| G2129765 | LOC106598425 | other | upstream | 430840 | 33572108 ~ 33575970 (+) |
| G2129724 | LOC106598452 | other | upstream | 553937 | 33452212 ~ 33452873 (+) |
| G2129708 | NA | other | upstream | 574703 | 33431751 ~ 33432107 (+) |
| G2129639 | LOC106598496 | other | upstream | 697819 | 33308098 ~ 33308991 (+) |
| G2130731 | NA | other | downstream | 128 | 34007631 ~ 34008262 (+) |
| LOC110508236 | LOC106598267 | other | downstream | 363358 | 34352592 ~ 34409491 (+) |
| G2131383 | NA | other | downstream | 595982 | 34603485 ~ 34604953 (+) |
| G2131416 | NA | other | downstream | 679768 | 34687271 ~ 34687640 (+) |
