Gene
RNA
| Item | Value |
|---|---|
| gene id | G2130854 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 34016298 ~ 34016990 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| apolipoprotein D-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2436426 | True | 693 | lncRNA | 0.43 | 1 | 34016298 | 34016990 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509046 | LOC106598598 | coding | downstream | 15442 | 33997091 ~ 34000856 (-) |
| LOC110509045 | LOC106598354 | coding | downstream | 25508 | 33977576 ~ 33990790 (-) |
| LOC110509043 | LOC106598366 | coding | downstream | 43561 | 33953697 ~ 33972737 (-) |
| LOC118944832 | LOC106598084 | coding | downstream | 100093 | 33914350 ~ 33916205 (-) |
| LOC110508229 | LOC106598404 | coding | downstream | 219012 | 33626451 ~ 33797286 (-) |
| LOC110509052 | LOC106598333 | coding | upstream | 21798 | 34038788 ~ 34058344 (-) |
| LOC110509051 | LOC106598333 | coding | upstream | 48549 | 34065539 ~ 34075144 (-) |
| LOC118944872 | NA | coding | upstream | 230955 | 34247945 ~ 34250438 (-) |
| zgc:110366 | LOC105007548 | coding | upstream | 241205 | 34258195 ~ 34269017 (-) |
| vcam1a | LOC106598299 | coding | upstream | 267278 | 34284268 ~ 34300628 (-) |
| G2130852 | NA | non-coding | downstream | 617 | 34014824 ~ 34015681 (-) |
| G2130847 | NA | non-coding | downstream | 9346 | 34006606 ~ 34006952 (-) |
| G2130806 | NA | non-coding | downstream | 108716 | 33907240 ~ 33907582 (-) |
| G2130805 | NA | non-coding | downstream | 109578 | 33906074 ~ 33906720 (-) |
| G2130789 | NA | non-coding | downstream | 140291 | 33875759 ~ 33876007 (-) |
| G2130855 | NA | non-coding | upstream | 2205 | 34019195 ~ 34019432 (-) |
| G2130856 | NA | non-coding | upstream | 3059 | 34020049 ~ 34020266 (-) |
| G2130857 | NA | non-coding | upstream | 3515 | 34020505 ~ 34020743 (-) |
| G2130859 | NA | non-coding | upstream | 4838 | 34021828 ~ 34022057 (-) |
| G2130865 | NA | non-coding | upstream | 11529 | 34028519 ~ 34028743 (-) |
| G2130393 | NA | other | downstream | 617214 | 33398547 ~ 33399084 (-) |
| LOC110508997 | NA | other | downstream | 1786084 | 32228406 ~ 32230258 (-) |
| asip2b | agrp2 | other | downstream | 1851276 | 32062049 ~ 32187519 (-) |
| LOC110508982 | NA | other | downstream | 1987740 | 32023057 ~ 32029225 (-) |
| G2128568 | NA | other | downstream | 2133158 | 31882715 ~ 31883140 (-) |
| G2130771 | LOC106598333 | other | upstream | 23216 | 34040206 ~ 34066665 (-) |
| G2130780 | LOC106598333 | other | upstream | 24448 | 34041438 ~ 34068073 (-) |
| G2131621 | NA | other | upstream | 468879 | 34485869 ~ 34486176 (-) |
| G2131641 | NA | other | upstream | 499532 | 34516522 ~ 34518129 (-) |
