G2130771 (LOC106598333)


Basic Information

Item Value
gene id G2130771
gene name LOC106598333
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 34040206 ~ 34066665 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2436339
GGATGGAAAAACtgagaaaggaagagaaagacagagaagaaCAGCTTCAAAATCAAGAAAGGAAGTTTGATAAACTAAAAAGGGAACAGGAGGAAGAAATTAAAAggagagagaaagaagaggatgagaggagaaagaaggaagagaaagaaagacaagaGTGGCAAAGAAAAATAGAGGAAGCAGAGAAAGGTCAAACAGAACTCCAAGAAGTCATGCGTAGTGAaaaagaggaatgggaggaacagttgaagaaagaaagagacagacaacAGGAAGAAGAAAGGctgaggagacagatggaggcaGACACTcttgtagaacaagaggaaaaaCAGAGGACATTGAGAGAGGAgtttgaaagagagagggaacgagataGAATAAAGATGAAGGAATCAGAAGATCAGAGGAGAGAAACCGAGCAGAAAGAAAGAGAACGAATAGAAAAAGACTttgaagaaaagaggagagagttgacagacaaaatgacaacGCAACGAGAGCAGTGGGAGAGAGAACGTGGAGAGGAACATGAAAGAAGAATTCAAGAGGATGTAAAtagaagagtggaggagagactAAGACTAAGAAAACTGGAGGAAACATTTCAC

Function

NR:

description
GTPase IMAP family member 8-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2436339 True 614 TUCP 0.41 2 34040206 34066665

Neighbor

gene id symbol gene type direction distance location
LOC110509046 LOC106598598 coding downstream 39350 33997091 ~ 34000856 (-)
LOC110509045 LOC106598354 coding downstream 49416 33977576 ~ 33990790 (-)
LOC110509043 LOC106598366 coding downstream 67469 33953697 ~ 33972737 (-)
LOC118944832 LOC106598084 coding downstream 124001 33914350 ~ 33916205 (-)
LOC110508229 LOC106598404 coding downstream 242920 33626451 ~ 33797286 (-)
LOC118944872 NA coding upstream 181280 34247945 ~ 34250438 (-)
zgc:110366 LOC105007548 coding upstream 191530 34258195 ~ 34269017 (-)
vcam1a LOC106598299 coding upstream 217603 34284268 ~ 34300628 (-)
LOC110509056 LOC106598260 coding upstream 238041 34304706 ~ 34321590 (-)
LOC110509050 LOC106598248 coding upstream 355507 34422172 ~ 34481859 (-)
G2130775 NA non-coding downstream 1536 34037063 ~ 34038670 (-)
G2130865 NA non-coding downstream 11463 34028519 ~ 34028743 (-)
G2130859 NA non-coding downstream 18149 34021828 ~ 34022057 (-)
G2130857 NA non-coding downstream 19463 34020505 ~ 34020743 (-)
G2130856 NA non-coding downstream 19940 34020049 ~ 34020266 (-)
G2131112 NA non-coding upstream 26879 34093544 ~ 34094130 (-)
G2131151 NA non-coding upstream 75393 34142058 ~ 34207960 (-)
G2131161 NA non-coding upstream 102686 34169351 ~ 34173099 (-)
G2131194 NA non-coding upstream 174716 34241381 ~ 34241613 (-)
G2131200 LOC106598276 non-coding upstream 185262 34251927 ~ 34252855 (-)
G2130393 NA other downstream 641122 33398547 ~ 33399084 (-)
LOC110508997 NA other downstream 1809992 32228406 ~ 32230258 (-)
asip2b agrp2 other downstream 1875184 32062049 ~ 32187519 (-)
LOC110508982 NA other downstream 2011648 32023057 ~ 32029225 (-)
G2128568 NA other downstream 2157066 31882715 ~ 31883140 (-)
G2131621 NA other upstream 419204 34485869 ~ 34486176 (-)
G2131641 NA other upstream 449857 34516522 ~ 34518129 (-)
lyrm4 lyrm4 other upstream 1938824 36005489 ~ 36017873 (-)
LOC118944844 riok1 other upstream 1957115 36023714 ~ 36025735 (-)
G2132971 NA other upstream 2157548 36224213 ~ 36225379 (-)

Expression


Co-expression Network