G2130780 (LOC106598333)


Basic Information

Item Value
gene id G2130780
gene name LOC106598333
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 34041438 ~ 34068073 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2436349
AAAATGCAGACACAAAGCAACTGATCAAGATATGCGGAGGGCGGTATAAAATCTTTGATGCTTCAAAGATTGAGAACGCTAAGCAGACAACAGAACTTGTAACAGAAATAATCAAAATGATGGATCAGAACAGAACCTGCTACACTCTGTACATGTACATGGAGGCTAAACACCAATCAGAACTGGAGGAAAAGAACAGAAGAATCAAGGATTTAGAGGAGAGAATCAGGAACACGTCACAAGGTGCTGAAATGGAGTGTTCCAGCACAGAGTGCATAAGGGTGGTGCTGATTGGGAAAACTGGCAATGGGAAGAGCGCCTCTGCAAACACTATCCTGGGCAGAGATGAATTTGAGTCTAAAATCAGCAGTAATTCTACGACAACAGTTTGCAAGAAGGCAGTCGGCAAAGTTGATGGAAGAACAGTTTCTGTGGTGGACACCCCTGGCCTTTTTGACACAACGTTGTCTAATAAAGATGTTCAGCAAGAGATAGTGAAATGTGTTTCCCTGTCAGCTCCTGGACCCcatgtgtttatcatagtgttgAGTATCGGGAGAATCACACAAGAGGAGCTGAACGCTTTGGACCTCATAGAGAAAACCTTTGGTCCACGGGCAGGAATGTTCTGCTTAGTTCTGT

Function

NR:

description
uncharacterized protein LOC110509051

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2436349 True 642 TUCP 0.44 3 34041438 34068073

Neighbor

gene id symbol gene type direction distance location
LOC110509046 LOC106598598 coding downstream 40582 33997091 ~ 34000856 (-)
LOC110509045 LOC106598354 coding downstream 50648 33977576 ~ 33990790 (-)
LOC110509043 LOC106598366 coding downstream 68701 33953697 ~ 33972737 (-)
LOC118944832 LOC106598084 coding downstream 125233 33914350 ~ 33916205 (-)
LOC110508229 LOC106598404 coding downstream 244152 33626451 ~ 33797286 (-)
LOC118944872 NA coding upstream 179872 34247945 ~ 34250438 (-)
zgc:110366 LOC105007548 coding upstream 190122 34258195 ~ 34269017 (-)
vcam1a LOC106598299 coding upstream 216195 34284268 ~ 34300628 (-)
LOC110509056 LOC106598260 coding upstream 236633 34304706 ~ 34321590 (-)
LOC110509050 LOC106598248 coding upstream 354099 34422172 ~ 34481859 (-)
G2130775 NA non-coding downstream 2768 34037063 ~ 34038670 (-)
G2130865 NA non-coding downstream 12695 34028519 ~ 34028743 (-)
G2130859 NA non-coding downstream 19381 34021828 ~ 34022057 (-)
G2130857 NA non-coding downstream 20695 34020505 ~ 34020743 (-)
G2130856 NA non-coding downstream 21172 34020049 ~ 34020266 (-)
G2131112 NA non-coding upstream 25471 34093544 ~ 34094130 (-)
G2131151 NA non-coding upstream 73985 34142058 ~ 34207960 (-)
G2131161 NA non-coding upstream 101278 34169351 ~ 34173099 (-)
G2131194 NA non-coding upstream 173308 34241381 ~ 34241613 (-)
G2131200 LOC106598276 non-coding upstream 183854 34251927 ~ 34252855 (-)
G2130393 NA other downstream 642354 33398547 ~ 33399084 (-)
LOC110508997 NA other downstream 1811224 32228406 ~ 32230258 (-)
asip2b agrp2 other downstream 1876416 32062049 ~ 32187519 (-)
LOC110508982 NA other downstream 2012880 32023057 ~ 32029225 (-)
G2128568 NA other downstream 2158298 31882715 ~ 31883140 (-)
G2131621 NA other upstream 417796 34485869 ~ 34486176 (-)
G2131641 NA other upstream 448449 34516522 ~ 34518129 (-)
lyrm4 lyrm4 other upstream 1937416 36005489 ~ 36017873 (-)
LOC118944844 riok1 other upstream 1955707 36023714 ~ 36025735 (-)
G2132971 NA other upstream 2156140 36224213 ~ 36225379 (-)

Expression


Co-expression Network