Gene
RNA
| Item | Value |
|---|---|
| gene id | G2130881 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 34078543 ~ 34078949 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2436454 | True | 407 | lncRNA | 0.37 | 1 | 34078543 | 34078949 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509049 | LOC106598340 | coding | upstream | 42613 | 34029842 ~ 34035930 (+) |
| LOC110509047 | LOC106598344 | coding | upstream | 60169 | 34013895 ~ 34018374 (+) |
| LOC110509044 | LOC106598377 | coding | upstream | 140516 | 33928219 ~ 33938027 (+) |
| cfap57 | LOC106598390 | coding | upstream | 228113 | 33811613 ~ 33850430 (+) |
| LOC110508288 | LOC106598607 | coding | upstream | 267746 | 33808020 ~ 33810797 (+) |
| LOC110509059 | LOC106598314 | coding | downstream | 48681 | 34127630 ~ 34173167 (+) |
| LOC110509053 | LOC106598276 | coding | downstream | 172975 | 34251924 ~ 34257831 (+) |
| extl2 | extl2 | coding | downstream | 190107 | 34269056 ~ 34278701 (+) |
| LOC110508236 | LOC106598267 | coding | downstream | 273643 | 34352592 ~ 34409491 (+) |
| LOC110508231 | LOC106598235 | coding | downstream | 420597 | 34499546 ~ 34568352 (+) |
| G2130750 | NA | non-coding | upstream | 7526 | 34044463 ~ 34071017 (+) |
| G2130749 | LOC106598333 | non-coding | upstream | 9449 | 34038792 ~ 34069094 (+) |
| G2130730 | NA | non-coding | upstream | 71040 | 34006810 ~ 34007503 (+) |
| G2130727 | NA | non-coding | upstream | 74498 | 34003836 ~ 34004045 (+) |
| G2130882 | NA | non-coding | downstream | 178 | 34079127 ~ 34082298 (+) |
| G2130883 | NA | non-coding | downstream | 4573 | 34083522 ~ 34084306 (+) |
| G2130892 | NA | non-coding | downstream | 16771 | 34095720 ~ 34150725 (+) |
| G2130974 | NA | non-coding | downstream | 162365 | 34241314 ~ 34241565 (+) |
| G2130976 | NA | non-coding | downstream | 167506 | 34246455 ~ 34246762 (+) |
| G2130731 | NA | other | upstream | 70281 | 34007631 ~ 34008262 (+) |
| G2129859 | NA | other | upstream | 349015 | 33729148 ~ 33729528 (+) |
| G2129765 | LOC106598425 | other | upstream | 502573 | 33572108 ~ 33575970 (+) |
| G2129724 | LOC106598452 | other | upstream | 625670 | 33452212 ~ 33452873 (+) |
| G2131383 | NA | other | downstream | 524536 | 34603485 ~ 34604953 (+) |
| G2131416 | NA | other | downstream | 608322 | 34687271 ~ 34687640 (+) |
| G2131426 | NA | other | downstream | 623257 | 34702206 ~ 34783418 (+) |
| G2131933 | NA | other | downstream | 1012750 | 35091699 ~ 35093034 (+) |
