G2130976


Basic Information

Item Value
gene id G2130976
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 34246455 ~ 34246762 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2436563
ttttatgtgtggattaattggcggcGTAGAGgatcttgtgcatttcaggtaaaagaacaactcaatgtttatatcccaggacaaattagctagcaacagcaagctagctaaatagaacAAATTAGGTAGCAagtgaaagctagctagctaaattgccatacatgtttaatgctttttgacctgtccccaaatgaatgtaattggttcagagtttgttttgatattttaacctgcgtgtagtgatcgcatttggtgtagggggacaaaataaatgtatggacGATGGCGCACGCACGCAGCCGGTTGGG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2436563 True 308 lncRNA 0.41 1 34246455 34246762

Neighbor

gene id symbol gene type direction distance location
LOC110509059 LOC106598314 coding upstream 73288 34127630 ~ 34173167 (+)
LOC110509049 LOC106598340 coding upstream 210525 34029842 ~ 34035930 (+)
LOC110509047 LOC106598344 coding upstream 228081 34013895 ~ 34018374 (+)
LOC110509044 LOC106598377 coding upstream 308428 33928219 ~ 33938027 (+)
cfap57 LOC106598390 coding upstream 396025 33811613 ~ 33850430 (+)
LOC110509053 LOC106598276 coding downstream 5162 34251924 ~ 34257831 (+)
extl2 extl2 coding downstream 22294 34269056 ~ 34278701 (+)
LOC110508236 LOC106598267 coding downstream 105830 34352592 ~ 34409491 (+)
LOC110508231 LOC106598235 coding downstream 252784 34499546 ~ 34568352 (+)
LOC110509061 LOC106598202 coding downstream 375093 34621855 ~ 34632610 (+)
G2130974 NA non-coding upstream 4890 34241314 ~ 34241565 (+)
G2130892 NA non-coding upstream 95730 34095720 ~ 34150725 (+)
G2130883 NA non-coding upstream 162149 34083522 ~ 34084306 (+)
G2130882 NA non-coding upstream 164157 34079127 ~ 34082298 (+)
G2130881 NA non-coding upstream 167506 34078543 ~ 34078949 (+)
G2130978 NA non-coding downstream 6251 34253013 ~ 34253292 (+)
G2130983 NA non-coding downstream 35877 34282639 ~ 34282844 (+)
G2130985 LOC106598299 non-coding downstream 41398 34288160 ~ 34289974 (+)
G2130994 NA non-coding downstream 59089 34305851 ~ 34307822 (+)
G2130749 LOC106598333 other upstream 177361 34038792 ~ 34069094 (+)
G2130731 NA other upstream 238193 34007631 ~ 34008262 (+)
G2129859 NA other upstream 516927 33729148 ~ 33729528 (+)
G2129765 LOC106598425 other upstream 670485 33572108 ~ 33575970 (+)
G2129724 LOC106598452 other upstream 793582 33452212 ~ 33452873 (+)
G2131383 NA other downstream 356723 34603485 ~ 34604953 (+)
G2131416 NA other downstream 440509 34687271 ~ 34687640 (+)
G2131426 NA other downstream 455444 34702206 ~ 34783418 (+)
G2131933 NA other downstream 844937 35091699 ~ 35093034 (+)

Expression


Co-expression Network