Gene
RNA
| Item | Value |
|---|---|
| gene id | G2130978 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 34253013 ~ 34253292 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2436565 | True | 280 | lncRNA | 0.35 | 1 | 34253013 | 34253292 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509059 | LOC106598314 | coding | upstream | 79846 | 34127630 ~ 34173167 (+) |
| LOC110509049 | LOC106598340 | coding | upstream | 217083 | 34029842 ~ 34035930 (+) |
| LOC110509047 | LOC106598344 | coding | upstream | 234639 | 34013895 ~ 34018374 (+) |
| LOC110509044 | LOC106598377 | coding | upstream | 314986 | 33928219 ~ 33938027 (+) |
| cfap57 | LOC106598390 | coding | upstream | 402583 | 33811613 ~ 33850430 (+) |
| extl2 | extl2 | coding | downstream | 15764 | 34269056 ~ 34278701 (+) |
| LOC110508236 | LOC106598267 | coding | downstream | 99300 | 34352592 ~ 34409491 (+) |
| LOC110508231 | LOC106598235 | coding | downstream | 246254 | 34499546 ~ 34568352 (+) |
| LOC110509061 | LOC106598202 | coding | downstream | 368563 | 34621855 ~ 34632610 (+) |
| agfg1b | LOC106568704 | coding | downstream | 386727 | 34640019 ~ 34646660 (+) |
| G2130976 | NA | non-coding | upstream | 6251 | 34246455 ~ 34246762 (+) |
| G2130974 | NA | non-coding | upstream | 11448 | 34241314 ~ 34241565 (+) |
| G2130892 | NA | non-coding | upstream | 102288 | 34095720 ~ 34150725 (+) |
| G2130883 | NA | non-coding | upstream | 168707 | 34083522 ~ 34084306 (+) |
| G2130882 | NA | non-coding | upstream | 170715 | 34079127 ~ 34082298 (+) |
| G2130983 | NA | non-coding | downstream | 29347 | 34282639 ~ 34282844 (+) |
| G2130985 | LOC106598299 | non-coding | downstream | 34868 | 34288160 ~ 34289974 (+) |
| G2130994 | NA | non-coding | downstream | 52559 | 34305851 ~ 34307822 (+) |
| G2131042 | NA | non-coding | downstream | 122091 | 34375383 ~ 34375784 (+) |
| G2130749 | LOC106598333 | other | upstream | 183919 | 34038792 ~ 34069094 (+) |
| G2130731 | NA | other | upstream | 244751 | 34007631 ~ 34008262 (+) |
| G2129859 | NA | other | upstream | 523485 | 33729148 ~ 33729528 (+) |
| G2129765 | LOC106598425 | other | upstream | 677043 | 33572108 ~ 33575970 (+) |
| G2129724 | LOC106598452 | other | upstream | 800140 | 33452212 ~ 33452873 (+) |
| G2131383 | NA | other | downstream | 350193 | 34603485 ~ 34604953 (+) |
| G2131416 | NA | other | downstream | 433979 | 34687271 ~ 34687640 (+) |
| G2131426 | NA | other | downstream | 448914 | 34702206 ~ 34783418 (+) |
| G2131933 | NA | other | downstream | 838407 | 35091699 ~ 35093034 (+) |
