G2131203 (LOC106598276)


Basic Information

Item Value
gene id G2131203
gene name LOC106598276
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 34254607 ~ 34255349 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2436811
CCGCCTCACACACATTCTGCTGATGTTTCTGTAAGTCCTCATGGTGTTCAAAGTCTTGTCCACACTGGGTGCACTTGGAAGGGCTCTGCTCATTGTGACATCTCATGTGTGCCGTCAAATCCTTTGCTTCGCTGAAAGTCTTTCCACACAAGGAGCATATTTTGACACGCTTGTTTCTTTTAGGCTGTCCTGTGGTAAGGGATGGGTCAGGGGCCAGAGAATACTGAGGTTGACCATCAGAGGGCTCTTCATTGATATTCCTCTCACTCTTTTGTGATATGAcctgtcctcttctctgtccttggGATCCCACTTTGTCAATCTGAAGCCTCTCTCTCCTCGGTGTTGAAGAGACCTCCGTCACAGGTAAAAGCATATCAGTAATGTCAAGTCTGTGTAGCAGCACTTTGGGCTGACGGAGCCGACAGGAAGTAGATAAACTAGAAATGTCCTGCACTTCTTGTTGGCTGCTGTGGGCTTTTCCTTGAATTTTCAGCCCACTGTCAGTGTGAAGGTGGTGAAAAGATGTATTGTTTTTCGCTGTTGTTTTCTTGTGTCTACACGCTACCTCCAAAAAAGCAGGCTTCACCTCTTTATTCAAAGGCAACAGTTCACTCTCCATGTGTTCCAACAAAGAGGCCATCTTTGGCTCATTGTCAGATGAGACAGGGCTCATACATTCCTGCTCAGGTTCTGATTGGACCTCTGGGTCAGCTTGGTCAGTGAAGGCTTCATCTATCact

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2436811 True 743 lncRNA 0.47 1 34254607 34255349

Neighbor

gene id symbol gene type direction distance location
LOC118944872 NA coding downstream 4169 34247945 ~ 34250438 (-)
LOC110509051 LOC106598333 coding downstream 179463 34065539 ~ 34075144 (-)
LOC110509052 LOC106598333 coding downstream 196263 34038788 ~ 34058344 (-)
LOC110509046 LOC106598598 coding downstream 253751 33997091 ~ 34000856 (-)
LOC110509045 LOC106598354 coding downstream 263817 33977576 ~ 33990790 (-)
zgc:110366 LOC105007548 coding upstream 2846 34258195 ~ 34269017 (-)
vcam1a LOC106598299 coding upstream 28919 34284268 ~ 34300628 (-)
LOC110509056 LOC106598260 coding upstream 49357 34304706 ~ 34321590 (-)
LOC110509050 LOC106598248 coding upstream 166823 34422172 ~ 34481859 (-)
LOC110508232 NA coding upstream 316684 34572033 ~ 34604132 (-)
G2131200 LOC106598276 non-coding downstream 1752 34251927 ~ 34252855 (-)
G2131194 NA non-coding downstream 12994 34241381 ~ 34241613 (-)
G2131151 NA non-coding downstream 46647 34142058 ~ 34207960 (-)
G2131161 NA non-coding downstream 81508 34169351 ~ 34173099 (-)
G2131112 NA non-coding downstream 160477 34093544 ~ 34094130 (-)
G2131204 NA non-coding upstream 5204 34260553 ~ 34261277 (-)
G2131210 NA non-coding upstream 6426 34261775 ~ 34262390 (-)
G2131211 NA non-coding upstream 8473 34263822 ~ 34265601 (-)
G2131215 NA non-coding upstream 23812 34279161 ~ 34279491 (-)
G2131216 NA non-coding upstream 25747 34281096 ~ 34281305 (-)
G2130780 LOC106598333 other downstream 186534 34041438 ~ 34068073 (-)
G2130771 LOC106598333 other downstream 187942 34040206 ~ 34066665 (-)
G2130393 NA other downstream 855523 33398547 ~ 33399084 (-)
LOC110508997 NA other downstream 2024393 32228406 ~ 32230258 (-)
G2131621 NA other upstream 230520 34485869 ~ 34486176 (-)
G2131641 NA other upstream 261173 34516522 ~ 34518129 (-)
lyrm4 lyrm4 other upstream 1750140 36005489 ~ 36017873 (-)
LOC118944844 riok1 other upstream 1768431 36023714 ~ 36025735 (-)
G2132971 NA other upstream 1968864 36224213 ~ 36225379 (-)

Expression


Co-expression Network