G2131281


Basic Information

Item Value
gene id G2131281
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 34405857 ~ 34409452 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2436902
ACTAACTTCATTTCTGAATTTAAATatcaatgcatttttttttttaatctcacAATTCATAATGCATAAATGCGTGTTTTCCATTGACGGTTAAATCATTTCCAAACCAAAATATAATATCCCTTTACACAGTATTGAGCCCGTGGGTAGTCCCTCTGGCATTTTCATCTTGTCCCCAAAAGTGTCCTCTTTGTTCACTTCTATTACACCTATTTTactctcactctctatcctcAACCCCTCCTTTCTCTGTAAAGTACATCCATTTTTCATGCAATGCTTCGTCGcatccccccTGCCTTAACAACTGGTTTGACCTTCATATATCTCCTTTGTATATACAGCCGTTCTCCTACATTTGATTTATGAAATGACAGGGTCTCGTTTCCACAATGCAGAAAATGGCTCATTTAATGGCTCACCAAACCTACTGCAATGGACGCCATTGGGATGCCAGCCCCTACTGCGATGGAAGCCATTAGGATGCCAGCCCCTACTGCGATGGAAGCCATTAGGATGCCAGCCTGGAAGTACAAAACAGTGACATATTTACAGACTCTCAGGGCAAACCTTCTGGCgtccaaatgttttattttcctgGGTTTTGGATGGCTGGGCTCCATCCCGTTGTGGTAGGCTGGGCTCCATCCCGTTGTGGTAGGCTGGGCTCCATCCCGTTGTGGTAGGCTGGGCTCCATCCCGTTGTAGTAGGCTGTTATTGAGTACAGTATCGTAGGTGAAATATTAACAATGAAAGCGGGTTTCCCAGGGGCTTTGTCCAAAATCCTCTTAAAATACTTCCTTTATTTTTTTTTCCTTTACCTTGTATATATAAAGATATAAAGAGACTACTTCTATGAAATTAATACGCCACAACCCATCAACAAGACACAAGGAGAGGAAGCTTCTTAAGAGTATTGGGACGAATACTTGTCTGAGACTTGCCAGCAATCCTACCTTCTCTGATGCATACAGTACTGTGTCTATGTCTTGCCCTTAAACAAGCCACAACTTGCCTTCCTAAGGACATGTCCATGATTTCTTTGTACCGACTAAAAGCATTCTCTGATCACTGATCATCAAGTCTTTGTCAAAGCGCATGCTGAGGTGAAATACACCAGTTTCAAGTATTCATGAAAGAATCCTTGATTGGCGGATGCTAGCCAAGTTTCCCTGTTTTCTGGAGATAATATTACATTTTCTCCCATAGGATTGGCCAAGCTAGTTCTTATtagagacacatccccttacTAGTGCTGGTTCACCTAACAAAAACAAACCTGAAGTTCTATCTACCTTTTTTCCTCCTGCCTACAAACACGTTGCCAGAGTATTGATGCTATTTCAAGGCTATCCTTTCTTGTTTCTTTTCCCTCCTGACCATTGAGTTGACAGAACGGGATTGTTGAGAGTAATGGTGCGTTCGAGTGGTCCTCGGAATCTCGGTATTTCCCAATTGGTTCCCAAGTTGTAAATTATGGCATGAGTGCGCTCGTGTTCTAATGAAGTTTGGAATAACTCTTCAACCAATGAGATTCTAGCTAGATGGCTAATCTAGCTAATGTTGCTTACGTTGACAATGTGTCAAACTATATACTGTACGGATCCACTAAGCTACGTTAATCACATGGTTAAGGTTGTAAATGGTTTTCTCCTACCGTCTAGTGGTTGAAAAGGTGAAGGGCCAGCGATGAAACGGCACAACTCTGGACCAtgtttcccacttgtgtttccgACTTTGAGGATCGTTCAAGTGGTTATTTCCGAGTCGGGAACTTGTATTTCCACATTTCCGATAGCACTCGAAAGCACCATAATATGGTAGATGCCTGCTGTGAGGCTTGTTGTAGTAGCCCCTCTGTATTGCTTTTAGTTGTCTAGTCCTGTAATACCGAAGAGTGTGAGGAGACTCCAAATTAGAGTATTGAGATCCACCCAACGTATTCCTCACCGAAAGGACAATCACCTGAGCAAAACCCATCCCACCCACCCATACCTGTTCCTTCCGAGCCCAACAGCGAGCTCTCATATACATTACATGTTTACCCTCACACCAGTGAAAAAGGGCATTCACTGTCACGCAATATGAACACAAACAATTTTTCAAACTTCTACAGTCTCAAACGAAAAACAGAATAACAATGATACTAAAATTGGGATGATGAGTTAGTCAACACATacataatattattattaatgGACAATAAAACTTGTGAGCGTGTCATAGCATTCAGAAAATCAACGCATGGGAAATCAAACGTGGTTTAAAGCAAATTTTTCACAGCATAAAAATTGGAAACGATAGATATTTGTATTGTGAAGAGACCACCATTTCTTTGTCTTGTCAcagctttttttttcttttttgcaTAAAACGTAGGTCAAGTCCTGATTGAAAATGTTTGTAGTCGCTTTTTTGTTTTCCTCTGGGTTTATCTTGATATTTGTCTAAAAGATTTTCACAGGCAAGAGTTTTTTTGTGGTCTTGGGTGTAGCTCCTCCCCCTCGTGGCGGTCCATCCCTTCAGAGGGCATGGTGGTGAGGGGAGTTTGTGgcccctcccccctctgtttAAGAGAGGGGGGACCGGGCACCCTAGTGGCCCCCCACCCTTGGGGCCCCGCTGCTAGGAATTCTGGTTGACAGCTTTCCCTCCGTTCATGGTGGGAGTCCCTGAGTTCTTCCTGGAGCGCTGTTTCTCCTCGATCTCATGCAGCGACGGCTCcctg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2436902 True 2729 lncRNA 0.43 2 34405857 34409452

Neighbor

gene id symbol gene type direction distance location
LOC110509056 LOC106598260 coding downstream 84267 34304706 ~ 34321590 (-)
vcam1a LOC106598299 coding downstream 105229 34284268 ~ 34300628 (-)
zgc:110366 LOC105007548 coding downstream 136840 34258195 ~ 34269017 (-)
LOC118944872 NA coding downstream 155419 34247945 ~ 34250438 (-)
LOC110509051 LOC106598333 coding downstream 330713 34065539 ~ 34075144 (-)
LOC110509050 LOC106598248 coding upstream 12720 34422172 ~ 34481859 (-)
LOC110508232 NA coding upstream 162581 34572033 ~ 34604132 (-)
LOC110509072 atp1b3 coding upstream 303815 34713267 ~ 34728197 (-)
gk5 gk5 coding upstream 328010 34737462 ~ 34761423 (-)
LOC110509071 LOC106598156 coding upstream 364303 34773755 ~ 34806814 (-)
G2131285 NA non-coding downstream 519 34405003 ~ 34405338 (-)
G2131283 NA non-coding downstream 1809 34403636 ~ 34404048 (-)
G2131282 NA non-coding downstream 4355 34400956 ~ 34401502 (-)
G2131279 NA non-coding downstream 7870 34397717 ~ 34397987 (-)
G2131208 NA non-coding downstream 26302 34375912 ~ 34379555 (-)
G2131318 NA non-coding upstream 73657 34483109 ~ 34483386 (-)
G2131619 NA non-coding upstream 74246 34483698 ~ 34483954 (-)
G2131623 NA non-coding upstream 84667 34494119 ~ 34494644 (-)
G2131643 NA non-coding upstream 159050 34568502 ~ 34570391 (-)
G2131691 NA non-coding upstream 177266 34586718 ~ 34587111 (-)
G2130780 LOC106598333 other downstream 337784 34041438 ~ 34068073 (-)
G2130771 LOC106598333 other downstream 339192 34040206 ~ 34066665 (-)
LOC110509052 LOC106598333 other downstream 347587 34038788 ~ 34058344 (-)
G2130393 NA other downstream 1006773 33398547 ~ 33399084 (-)
LOC110508997 NA other downstream 2175643 32228406 ~ 32230258 (-)
G2131621 NA other upstream 76417 34485869 ~ 34486176 (-)
G2131641 NA other upstream 107070 34516522 ~ 34518129 (-)
lyrm4 lyrm4 other upstream 1596037 36005489 ~ 36017873 (-)
LOC118944844 riok1 other upstream 1614328 36023714 ~ 36025735 (-)
G2132971 NA other upstream 1814761 36224213 ~ 36225379 (-)

Expression


Co-expression Network