G2131643


Basic Information

Item Value
gene id G2131643
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 34568502 ~ 34570391 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2437355
TTAGTAATGAGATGGGTTTGCTGGCATGTAGTACACAAGTGACAATTTTTGATGACATTACACGAAGATGGAAACAAGGGTGGGTCGGGGAGATAAACGTAAACCTATTATCCCAAACCAGTCAAAGCCTGTTGAGGTCAATTGTGGATGGTGACGTTGCACTTTGCAAGGGTTGGTTATTTAATGTGGGTTGGTGGCAATAGCTGGCACAGGTCAGCTGTCCTACTCCGCCAGGCACATTGAGGGCTTCTGTTCACAGATTAGATACTGTACTCAATCCACACCAACAATCAGCCCGAACAATGATCGCCTGAGATTTTAGACAAATACGTATGCTTACAGCAGAATATGTGTATATTATGCACTTTCTTGAGAAATATCTTTGGAATATATGCTTATATAAATAtgcttatatatattttttgtgagtAGTAGAGCTGTGCCATGTAATGCGTTATCATCGGTTGGCTGGGTGGTATGGTCGCAGACGATTGGCTGTCTGTGACATGCCATCACCCATGACTGGCTATCTGTGATGCATTACCCCCTGGGATTAGGCATCAGATGATAATTACCTATAGCGTGGCCACAGCTCTGCCCAAGTATTAAGAACATAGAACAAGGGTTGCACAAGGACCTACAGATCAAGACTTAAGGTTAATCATTAAAACTGCACTACCCATAACATTCAATTAGGCTGTATCCTCTTTCAATCTCCTGCATCGTCTGCAGTGAATCTTTTTTTTGTACGTAAGAAATGCAATGTCTGcatatcatttttttttcttccccagAATGCCCCTCTGATCTCCTTTTCCTGTCTTGTCCATAGACCTTGCCaggctacccagactccttgctctggtcaaaagctacattagtttcttctccacaatgagtctggatctgagtacctctcCTGACAATTTCTAGAATGGAAATCCGTTCTCGACAATCTGATTGGTCGCAGAAACCAATAGGTTGGGCCAGAGCCCAAACACACGTGGGTAAAGCGACATTTGACAAtttgtcattggctttgatactctgattggttagaaatgatccaatcgctgatgacttttgtacaacacccctcattttTTACATCACAACAAACGACTTCAATGATgtcagtctcagactgaagtctGTAGCGATAaattcagtttgagtcgtcaggcaagcATAGACCAGCATGCACCTGTAGTCAAGGTGAGTCAGGTGTTGCCTCTAACTGCTGGTCCAGTGCCCTCTTTTTTAATGATCTGACCCCAGATCTGTGTTGCGGGCAACTTCTACATGAATCCCTTTGAGGATATTTAAGGTGCAATGCACTGTAGTGACGTTGGACATTGAAATGGATTAGAGACTTAAATCTGCCCATCCATTGGCAGACATGAGCAGCAGGCCAATAGGAATGGAGGAGTAGCATGAACAACCTAACTGGTTAAACCAGTGCAATACCCCTTCCATTGATAAATCAACACGGCGGTCCGCACCAAGTCCCTtatgcctgtgcgtgtgtgtgttagtgtgtgccgAGCTACACTGTATGCAGGTCAACTCTGAAATGATTGTTTGAAACATGAACATTTCTTACAGCGCAGGTCCGAAATGTATAACGATGTTTAActatcttttttttttgtgtgtgtaaatAATGTGCAGtgtgaaagctagagagagaacacagcgcTGACTGTGCTCTTCATTCTGAAAAGGaaaagaagaaagagaagaaaaaaaacatgtttgagAAAGAAGTACTGTATGCTGATTGGTTCTGTTGTCGAGAGAAataaatatgaacttggtctCACTGTGGAAGA

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2437355 True 1832 lncRNA 0.43 3 34568502 34570391

Neighbor

gene id symbol gene type direction distance location
LOC110509050 LOC106598248 coding downstream 86643 34422172 ~ 34481859 (-)
LOC110509056 LOC106598260 coding downstream 246912 34304706 ~ 34321590 (-)
vcam1a LOC106598299 coding downstream 267874 34284268 ~ 34300628 (-)
zgc:110366 LOC105007548 coding downstream 299485 34258195 ~ 34269017 (-)
LOC118944872 NA coding downstream 318064 34247945 ~ 34250438 (-)
LOC110508232 NA coding upstream 1642 34572033 ~ 34604132 (-)
LOC110509072 atp1b3 coding upstream 142876 34713267 ~ 34728197 (-)
gk5 gk5 coding upstream 167071 34737462 ~ 34761423 (-)
LOC110509071 LOC106598156 coding upstream 203364 34773755 ~ 34806814 (-)
LOC110509075 LOC106598143 coding upstream 242326 34812717 ~ 34824535 (-)
G2131623 NA non-coding downstream 73858 34494119 ~ 34494644 (-)
G2131619 NA non-coding downstream 84548 34483698 ~ 34483954 (-)
G2131318 NA non-coding downstream 85116 34483109 ~ 34483386 (-)
G2131281 NA non-coding downstream 159050 34405857 ~ 34409452 (-)
G2131285 NA non-coding downstream 163164 34405003 ~ 34405338 (-)
G2131691 NA non-coding upstream 16327 34586718 ~ 34587111 (-)
G2131696 NA non-coding upstream 26864 34597255 ~ 34597523 (-)
G2131699 NA non-coding upstream 38639 34609030 ~ 34609835 (-)
G2131702 NA non-coding upstream 49253 34619644 ~ 34619924 (-)
G2131735 NA non-coding upstream 111887 34682278 ~ 34682482 (-)
G2131641 NA other downstream 50373 34516522 ~ 34518129 (-)
G2131621 NA other downstream 82326 34485869 ~ 34486176 (-)
G2130780 LOC106598333 other downstream 500429 34041438 ~ 34068073 (-)
G2130771 LOC106598333 other downstream 501837 34040206 ~ 34066665 (-)
LOC110509052 LOC106598333 other downstream 510232 34038788 ~ 34058344 (-)
lyrm4 lyrm4 other upstream 1435098 36005489 ~ 36017873 (-)
LOC118944844 riok1 other upstream 1453389 36023714 ~ 36025735 (-)
G2132971 NA other upstream 1653822 36224213 ~ 36225379 (-)
G2132966 NA other upstream 1665124 36235515 ~ 36249775 (-)
G2133007 NA other upstream 1692611 36263002 ~ 36263330 (-)

Expression


Co-expression Network