Gene
RNA
| Item | Value |
|---|---|
| gene id | G2131691 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 34586718 ~ 34587111 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| transposase, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2437431 | True | 394 | lncRNA | 0.51 | 1 | 34586718 | 34587111 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509050 | LOC106598248 | coding | downstream | 104859 | 34422172 ~ 34481859 (-) |
| LOC110509056 | LOC106598260 | coding | downstream | 265128 | 34304706 ~ 34321590 (-) |
| vcam1a | LOC106598299 | coding | downstream | 286090 | 34284268 ~ 34300628 (-) |
| zgc:110366 | LOC105007548 | coding | downstream | 317701 | 34258195 ~ 34269017 (-) |
| LOC118944872 | NA | coding | downstream | 336280 | 34247945 ~ 34250438 (-) |
| LOC110509072 | atp1b3 | coding | upstream | 126156 | 34713267 ~ 34728197 (-) |
| gk5 | gk5 | coding | upstream | 150351 | 34737462 ~ 34761423 (-) |
| LOC110509071 | LOC106598156 | coding | upstream | 186644 | 34773755 ~ 34806814 (-) |
| LOC110509075 | LOC106598143 | coding | upstream | 225606 | 34812717 ~ 34824535 (-) |
| LOC110508238 | LOC106598127 | coding | upstream | 281402 | 34868513 ~ 34888930 (-) |
| G2131643 | NA | non-coding | downstream | 16327 | 34568502 ~ 34570391 (-) |
| G2131623 | NA | non-coding | downstream | 92074 | 34494119 ~ 34494644 (-) |
| G2131619 | NA | non-coding | downstream | 102764 | 34483698 ~ 34483954 (-) |
| G2131318 | NA | non-coding | downstream | 103332 | 34483109 ~ 34483386 (-) |
| G2131281 | NA | non-coding | downstream | 177266 | 34405857 ~ 34409452 (-) |
| G2131696 | NA | non-coding | upstream | 10144 | 34597255 ~ 34597523 (-) |
| G2131699 | NA | non-coding | upstream | 21919 | 34609030 ~ 34609835 (-) |
| G2131702 | NA | non-coding | upstream | 32533 | 34619644 ~ 34619924 (-) |
| G2131735 | NA | non-coding | upstream | 95167 | 34682278 ~ 34682482 (-) |
| G2131736 | NA | non-coding | upstream | 97870 | 34684981 ~ 34685268 (-) |
| G2131641 | NA | other | downstream | 68589 | 34516522 ~ 34518129 (-) |
| G2131621 | NA | other | downstream | 100542 | 34485869 ~ 34486176 (-) |
| G2130780 | LOC106598333 | other | downstream | 518645 | 34041438 ~ 34068073 (-) |
| G2130771 | LOC106598333 | other | downstream | 520053 | 34040206 ~ 34066665 (-) |
| lyrm4 | lyrm4 | other | upstream | 1418378 | 36005489 ~ 36017873 (-) |
| LOC118944844 | riok1 | other | upstream | 1436669 | 36023714 ~ 36025735 (-) |
| G2132971 | NA | other | upstream | 1637102 | 36224213 ~ 36225379 (-) |
| G2132966 | NA | other | upstream | 1648404 | 36235515 ~ 36249775 (-) |
| G2133007 | NA | other | upstream | 1675891 | 36263002 ~ 36263330 (-) |
