G2131387


Basic Information

Item Value
gene id G2131387
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 34742654 ~ 34749088 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2437033
ATGCAGCAAGACACGTGATGCAGTAAGACACGTGATGCAGTAAGACACGTGATGCAGTAAGACACGTGATGCAGTAAGACACGTGATGCAGTAAGACACGTGATGCAGTAAGACACGTGATGCAGTAAGACACGTGATGCAGTAAGACACATGATCCAAAGCACACAACCAAGCCTAcgtgaaaatggctaaaaaggaacacatgtgaagttttggaacggcctagtcaaagtccagacctaatcccaattgagatgttgtggcaggacttgaaacgagcagttcctgcttgaaaacccacaaaagTCGCTGAgctaaagcagttctgcatggaagagtgggacaaaattcctccacagcaacgtgagactgatcaacaactacaggaagcatttggtttgagtcattgcagctaaaggtggaacAACTAGTTATTGAgtgaaagggggcaaatacttctTCACGGCACTGTAGAGAGATCTGTAAAATCAGTAACAATCACCGATCAATACATCAATACCACAATACAATCTAAAGAATAGTTTGAGATGATCTGAAACGTATAGGGAGTACTCCACTGTAGGCCTACCTGATCTTCCTGATGGGAATGTGTGTTTCTCTAAGCATCGTCTCATAGAGCTGCTTGTTCCTAcgaaatggcacacacacacacacaaaacacacacatcagtGTTAACCATCTTCAAATATACACGTGGACAGTTTATTATTAGGTACATCACCCAGTTCACGAAAATGGATCGATCCTACAAAAGTGAGTCACGTggctgtggcttgctatataaagcaggcagacaggcatcgaggcattcagttactgctTGAATGGGTAAAATGAGTGACCTACTTTGAGAGTGGTATGATTGTCGTTGCCAGActttgagacttgtcccgaagccactcctgcgttgtcttggctgtgtggttaggatcattgtcctgttggaaggtgaactgtcgccttttggcaaactccaagtgggctgtcatgggtcttttactgaggagtggcttccatctggccactctaccatgaaaggcctgattggtggaaagttgcagagatggttgtccttcatcTTCTGAAattttctcccatctccacagaggaactctggagctctgtcagagtgaccatcgggttcctggtcacctccctgaccaaggccctcctcccccaattgctcagtttggccatgtggccagctctaggaagagtcttggtggttccaaacttcttccatttaagaattatggaggccactgtgttcttggagatcttcaatgctgcagacattttttggtacccttccccagatctgtgcctcgacccaGATCTGGAGCTctctggacaattccttcgacctcatggcttggtttttgctcgaacatgcactgtcaactgtgggactttatatagacaggtgtgcctttccaaatcatgtccaatcaattcaatttaacagggtctgaataattatttaaataaggtatttaatgttttttatttgtaatacatttgccaaaatttccaaaaaacgttatttttttgctttgtccGTTTTGAGGTGTTGTCTAGATTGCTGAGACAAATTTTGgacttaatacattttataacaaggctgtaacgtaacaaaatgtgggaaaagtgaaggggtctgaatattttcccgaAGGCACTGAACCTTCAGATAGATTACTTGGTCTTCAAAACACAATTTTGTCCCTTGTGCCCACGTTAATTTCACAATTAATTCATCTTTATCGATAAATTCAGAATTTATATTAATAACTTGACCAATATCGCCAACACATATCTACCCACACACATAGGCACGCACAAACTCTCAAGCAAACACACTGACCTAAATGCAACAGACTCCAGAATGGCTCGGACCAGGTGACTCTTGGTTGTGGATGGTTTTAGGCCCATGAAAGAGGCGCATGCTTTGGGATCATTTAAAGGAGCCTGGTGAACACACAAACACGTTAAACATACATAGTGAGGAcacaacactaacactaacacaccatagctagggccctataaaatctacGATGTGGAGAACGTGAACAGAATCACGGAATCTAGATATTCAAATGGACTTCAATATTCAAATAAATGTATTGAATTCATTACAAAATTAATTCACTTGCCCAAGTTAATCATgagacatcaacaaaatgcaaCAGTGATTTGTATTGTCCTGCAACGGCACAGcaatgtgtgtgggtgggggttaCATGCGTATGTCTAAACTTTGTGTAGCCgatagcgatgatgctaatgataaccttctgcTAGCAGAGAAAGAAAGGCTTTCCTAAAAAAAACTCCTCAGTTAAATGTAAACTACAACGTAGCCTATATGCCTGGCAGAATGAGATCAGGATGATTCGCATCAATCCTGTGGCcattttgttttgcaaactctgcaATCACATGATCGCCACAGAAACACAGCTAGCCAAACAACGGTTTCAGGCTGCTGCACACTTCCATTACAGGATAACTACACcgaaaaatctaaatgtattgtattgtttttttttacatagactGCAAAAGTGGACTCCTGATATGGTTTAATCATTGttgtggacatagaacatccaattttgttgtttttctatttaaaaaaaaaagtgtgatttTGAAAGGCAAAACCAGAAAATAATAGGAAAAAACAGAAACCTGTAAATACAAAACTGAGAAAACGGAATCAGGCAAAACATTGTactgattttatagggccctacatatatatacacacacacacacacacacacatatatatatatatatatatatatatataaataaataaccaAACCCAAGAGCATATATAAACAACATTTCATAAACATAAACAAAGgcatatacacaaacacaacatTATTCCAGCATGTTTTGGGAGCGTAAACTCACATGAAATGAAACAAGAGACAAACTTACAAAAGCTGGTTGCACAAAGGTAGGCAGAGAAGGAAAAGACGACGTTATGACAACACTGTTGTGACAACGCTGTAGACACATTAATGATGACACTACTTCCGAGGTCACCCAGAAACACCCACAAAACCACAAAACTCATAGGCTGATGGCACACCCAACTGTCATTAACACTCTCACTGTGAAACCAATACACAGtatacgcgtgtgtgtgtgtctgtgtgtctgtgcaagtgaacacacacacacacacttcaatcaTTCCTGtgtgcatacacacactcacctgcaGGCCACTAAACGAGGGAACGAAGCACACACCGTCCGAGTTGGCCACACTGTTGGCCATGGCATCTGTCTCCCGTACATCTGAGAACAGCTCTGGAACGACACAACTGATGTCACTTCCTCTGACATCACCAAACTATGGGATAAATATGAACTTATATGCACGTTGTGTTTTCATGCCCTTTTTCTATCAAATATCAATATATGAATTACGCATGGTTGGCGTCTTTCCCCTTACTTTTGAGAATATCCTAATTACAGAGCTCCTGGATTGTTGCCAAACAGGCATCATGCCAGTGGTCAGACTCACCCAGCTCCTGTGCCCACTTAATGGCTGTGCCAGTGTCTGCTGCATTGCCCTCTGCTAGATACACCACCTCTGGGCCGATCTTCCACCCCACAACAGGGTAGAGACCTGTACAAACAACAGATTTCCATGGCAACCTGGGACAATGTCTGAACTGCatactttttttttgtaaaagTGTCTTATTCATTGATATTGTTGTCTACTGAGCTAGAGGGaatacccccccccaaaaaaaaaatatttgtgaaaagaaaaacaaaatgaAAAGCCTGGGAATCTGAGTGGTATGTATTACAAAAGCAAGTTAGATCTTCTCTGGGTTTCTAAAGCTAACcggcttcagttagcttcacattccttCTCAGGCTTCATCTGTACTACGATGGTGGATAAATGCTCGTCCGCCTGTCGCCAACTCTAGCAGGCTTGGTAACTGCGCGTGCATGTTACACGTGTCTAGTCGAACcccgaactcttcattgagacaattctgaaacatcaatccatggGGGAGTCAGCGCTAAATTTGAACCTTTGATCCCACTGCTATTGATAAAATAAGCTAATTGTATGGTCATACAAACATTTTAGTACTGTGCATGAAGTTTCAAATGCattctgtcattactaaatgtgtaatgtgatagGTATTTTAACATGACTATATTTTTAAACACCAACAAAAACATTTGATTCATAAAATATTTAATCAGTCGTCTTCCTCAAATTAATGATCATGagatttcattggtcctcaactctTTTAACGACACTTCATTCAGGATAAAtggagttagccctgagttagcctgccccgAAGGTTCAGGAGAAGACCAAGGACCCCCTAAACAAGGGGACTGGAATTGGTCCAACTCATTCTAATACATGTACAAAATGATCCTCTTTACCTAAAAGCATGATAGTTTGGAGGATATAGTGGTAAGGTTTGCCGGCCCTCGTCtttgtctcgggcctaacaacacctgtgccaatatatcctccaaacaccggcttcgagggcattatcacttaagttATTGCCCCTTTAAAAATGGAGGACAGAATTTTAGCAACATAAAATCTTATTAAAATCTGTTTATATACACCACCAGAAAAAATATTACACTACTTTTgtacattttctgacaagcgagaacttagatatggtcattttcccATTTTCAgaaattcttagaatgtttgaGAATTACATGTACTAagacatttgtgaaaattctaaaGCAATTTGGAGTGAGAAAGCTTTTGGACAaataatagacactgcagtaaataaaaccgaATCAAAACATCTGTCTCATCCAGAACCAGAGTCTACACAAACCAATGTGCCACAGTCAAAATCAGaggtacagtaggcctatacGCAAAAAAAGCCATTTGCCACAAGGGTCTGCCATTATTCACTTTGAAATGGATTGTGGGTATTTACAGGCAGTTGCAAAAGCGCGGGTTTAGATCATTTGAACCCATTCggcaaaagccacaaaatacacttagtgccttcggaaagtattcccttgacttttcacacattttgttacattaccgtCCACTTCTAAAAAAGTATtaaattattttgttttattctcatcaaatctacacacaataccccataatgacaaagcaaaaacaggtttacataagtattcagaccctttactcagtactttgttgaagcacctttggcagtgattacagcattgacTCTTCTTTGGGTacgaagctacaagcttggcacacctgtatttggagagtgtCTCCCAGTCTTccctgcatatcctctcaagctctatcatgTTGGATGTCCCCCACCCCCtcagattatttatttattgaagaTCTACACTGATCTCTCCAGAATCCAATGTGATGGAGAACTTTAACCCTTTCATGGGGCTCTGGGCTGAGTTTATGTTTGTGGAATAAACCTGTTTACAGATTAGAatctggtgtgttagagcagggaTTGAACAAAAGCCTGCCCAGCCAGTAGCTCTTAAGGAGGATTTTTACCAACCCCGACTTAGCCCTTGTGtccatgaatgagtgagtgagtgtgtaggcCTGATTGCATGTTGACTTTGAGGGCCAATTTCCTAGTCACAGATTAAGCATAGCCCTGAGCTAAAAAGCCATTTCAATGGAGATTTCCCCGTTCAGTATACTTCTCATACTGAGGGTGATGGTAAGTGAGACCATGTTCATCTCTGAGGCAGGATGTAGCCTCTAGCTAGCTATGTATGACTATGTCCATATCTGAGTCATTTtaataactaacccaagatagaccgcagcctgtcgtttccaatggcaGCAAATTAATcctagtgggcagaacaagcaaggggctgggcagagccaagcatgaGCTAGCGAGAGCTTATTGGCGCGTTCCAGCATGTATTTCCATAATTccattagggaacgcctactctgtgaagcgcgcatgtgcaataactcaattcaccCTTGCATTCCTAAACAAGACCATTTTTGTataactttggcaaagggtaaagtctacaaaacttagtccactctgtaacagattctagttttggaaacagaaaactgtattgaggtcaaatgtttcattgattacatttttttgcagaATGTCAACCACATGTCTACAtgcggtgaaatatctgtctcatagTTCTGTAATCTGTGATGAAGCAGTTAGCTACGTACCGGCCACAGATGTGTGTGGCTCGCTCCCAGTGTTGATGTTCATGAAGGTGCCCGTTCCCATGGTGATCTTCACATCACCGATGTCGAAGCAGCACTCACCAAACATGGCCGCCTGCTGGTCTGCCA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2437033 True 6413 lncRNA 0.41 2 34742654 34749088

Neighbor

gene id symbol gene type direction distance location
LOC110509067 grk7 coding upstream 42423 34692295 ~ 34700231 (+)
LOC110508234 NA coding upstream 88305 34653129 ~ 34654349 (+)
fbxo36b LOC106598179 coding upstream 90132 34648851 ~ 34652522 (+)
agfg1b LOC106568704 coding upstream 95994 34640019 ~ 34646660 (+)
LOC110509061 LOC106598202 coding upstream 110044 34621855 ~ 34632610 (+)
LOC110509070 LOC106598580 coding downstream 17686 34766774 ~ 34769328 (+)
LOC110509069 NA coding downstream 47644 34796732 ~ 34803585 (+)
LOC110509077 NA coding downstream 62806 34811894 ~ 34814719 (+)
LOC110509073 LOC106568697 coding downstream 75881 34824969 ~ 34867323 (+)
si:ch211-252f13.5 LOC106598121 coding downstream 149439 34898527 ~ 34903418 (+)
G2131427 NA non-coding upstream 3465 34735325 ~ 34739189 (+)
G2131435 NA non-coding upstream 18441 34723922 ~ 34724213 (+)
G2131384 NA non-coding upstream 27613 34712747 ~ 34715041 (+)
G2131419 NA non-coding upstream 51950 34690505 ~ 34690704 (+)
G2131417 NA non-coding upstream 54554 34687883 ~ 34688100 (+)
G2131461 NA non-coding downstream 20569 34769657 ~ 34842222 (+)
G2131462 NA non-coding downstream 21834 34770922 ~ 34774136 (+)
G2131472 LOC106598156 non-coding downstream 35917 34785005 ~ 34786316 (+)
G2131510 NA non-coding downstream 96210 34845298 ~ 34846409 (+)
G2131416 NA other upstream 55014 34687271 ~ 34687640 (+)
G2131383 NA other upstream 137701 34603485 ~ 34604953 (+)
LOC110508236 LOC106598267 other upstream 368644 34352592 ~ 34409491 (+)
G2130749 LOC106598333 other upstream 673560 34038792 ~ 34069094 (+)
G2130731 NA other upstream 734392 34007631 ~ 34008262 (+)
G2131933 NA other downstream 342611 35091699 ~ 35093034 (+)
G2132291 NA other downstream 950758 35699846 ~ 35700235 (+)
LOC110508289 LOC106597230 other downstream 1224351 35973386 ~ 35975132 (+)
G2132519 LOC100380659 other downstream 1590006 36339094 ~ 36364994 (+)
G2132611 LOC100380659 other downstream 1616468 36365556 ~ 36369967 (+)

Expression


Co-expression Network