G2131472 (LOC106598156)



Basic Information


Item Value
gene id G2131472
gene name LOC106598156
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 34785005 ~ 34786316 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2437161
gtgagtgtgtgtctatAATAACCTCAGTGCACAGGACAcggtgtaaacagtacagtgaaatgctactgGTCTGTAGCCCTCCCTTCCCGTCTTGTTTTCTATAGATTTTAAAATGTCCCTATTTCCAGTCCTACTTACATGACCTAGAGTAGGTCCTCTGGGCATGATGGTGGCCTTGTTGATGGGCATGGCATCCTTGGTGTAGTACGCCACGATAGCGTGGCCAGACTCGTGGTACGCTGTGATCTCCTTGTTCTTTTTATCTatctccacactcctcctctctggGCCCATGAGGATCTTGTCCTTGGCGAACTCCAGCTCTTTGAGGGTCACCATGTCTTTGCCGTCCACCGCCGCCTTCAGAGCCGCTTGGTTGACCAGGTTCTCCAGGTCGGCCCCGGAGaagcccactgttcccc

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2437161 True 422 lncRNA 0.52 2 34785005 34786316

Neighbor


gene id symbol gene type direction distance location
LOC110509070 LOC106598580 coding upstream 15677 34766774 ~ 34769328 (+)
LOC110509067 grk7 coding upstream 84774 34692295 ~ 34700231 (+)
LOC110508234 NA coding upstream 130656 34653129 ~ 34654349 (+)
fbxo36b LOC106598179 coding upstream 132483 34648851 ~ 34652522 (+)
agfg1b LOC106568704 coding upstream 138345 34640019 ~ 34646660 (+)
LOC110509069 NA coding downstream 10416 34796732 ~ 34803585 (+)
LOC110509077 NA coding downstream 25578 34811894 ~ 34814719 (+)
LOC110509073 LOC106568697 coding downstream 38653 34824969 ~ 34867323 (+)
si:ch211-252f13.5 LOC106598121 coding downstream 112211 34898527 ~ 34903418 (+)
LOC110509083 LOC106598110 coding downstream 150210 34936526 ~ 34939328 (+)
G2131462 NA non-coding upstream 10869 34770922 ~ 34774136 (+)
G2131387 NA non-coding upstream 35917 34742654 ~ 34749088 (+)
G2131427 NA non-coding upstream 45816 34735325 ~ 34739189 (+)
G2131435 NA non-coding upstream 60792 34723922 ~ 34724213 (+)
G2131384 NA non-coding upstream 69964 34712747 ~ 34715041 (+)
G2131510 NA non-coding downstream 58982 34845298 ~ 34846409 (+)
G2131536 NA non-coding downstream 117479 34903795 ~ 34904100 (+)
G2131538 NA non-coding downstream 124794 34911110 ~ 34912582 (+)
G2131540 NA non-coding downstream 127120 34913436 ~ 34945186 (+)
G2131426 NA other upstream 1587 34702206 ~ 34783418 (+)
G2131416 NA other upstream 97365 34687271 ~ 34687640 (+)
G2131383 NA other upstream 180052 34603485 ~ 34604953 (+)
LOC110508236 LOC106598267 other upstream 410995 34352592 ~ 34409491 (+)
G2130749 LOC106598333 other upstream 715911 34038792 ~ 34069094 (+)
G2131933 NA other downstream 305383 35091699 ~ 35093034 (+)
G2132291 NA other downstream 913530 35699846 ~ 35700235 (+)
LOC110508289 LOC106597230 other downstream 1187123 35973386 ~ 35975132 (+)
G2132519 LOC100380659 other downstream 1552778 36339094 ~ 36364994 (+)
G2132611 LOC100380659 other downstream 1579240 36365556 ~ 36369967 (+)

Expression



Co-expression Network