G2131538


Basic Information

Item Value
gene id G2131538
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 34911110 ~ 34912582 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2437233
TGCTTTATTTATATTTTACAGTAACCACAAATCTTTGGCTATGTTCAGGATAACATTCATCCAAAATGCAAGTCGTTGACATTGACCTGGTTGCCATCAATACCGTTCTGACACCTGTATAGCTGACACAACAGAAGCCCACTCTCACTACAAGATAGTTAGAGGTATTTTTGATATACCATTTTAGGAGGCCATGTAATATTACATGCTCATGATTGTACTTGAAGCCTTACGATTAATTTGCACATTTCCTTTAAATGATGAAATACTACAATCAATGCTATGGTGCATTCCCTCCTTAATATATTATTTTTAGAGCCCCCATTGCTCTTTAAAAGCATTAACATCCACTTATTTATATCAACTACTTCAATTGGTTACTACTGCTGTTTTCCATTGAGTTTTATTAGAAAGAAAAAAGGAATTGTCAATCAAAGTGTAAATATTTCAAAAGAGAGAAGGCTTTGATCTAAAAAGGTatctataaacagtcaacttCTTTCCTACAGGTTAAAAATCCTAATGATGGATAGAAATTCTAAGCCAGATATGTTTAATCTCTTCTCGATTCAAAATGGAGCCATGTATGTACCGGAAAGCTTCCAATGAGATTCCTTGGAGCTTGAGTGGTGCAGCAGAAAGAAAATAAATGGCATCTTTTAAGGCTTCGTCAAGGCATCTATGTGGTAGACACAGTAAACGTGGTATGAACTAATGATACAGCCAACATCAACTATCAGCCACAAACAAGAAAGGAGTAAGAACAGGGggatgctgaggagtatttctccTCAACTGATACAGGAGCAGTAAAGGACAAAGTTCActaattttgtttttttttaaaaaaagcaAATTGacttgtttttttccccaagGGGTGTTGCAGCGccttcagcacccctacttcccacaGCTTTGAATAAAGAAAAGAGGGAAAAAAAAGAATGACAAATAGTTGGTTACATTACTGTATGTAAGAAGAGCCTAACTGTGGAATGTGTGATAATCAACATAGTATATCAATATGTTATTCAGTTTTAAGAACAGTATTTATAATTCAGGTCTATGACTTTTAAGTCATTATCCAGTATACGGCCCAGGATACTTGGCAGTCTTCTGTTCATAACTCAATGTAGAAGTTAGTGACATCTTGTGTCTGTGTTAGTAACACATGACGGTGTGGTTGGTTTTTGGTCCATGCTGCAGTCAGAGccggagagaaggaagaggatgagagaggtaGAAGTATTAGAAGACAGGTGTTTTAGGAGTGTAACTGTCAAAGAAGGATAAAGAATAAGaggaacagaaagagaaacaAACAGGGGTCTTAGTGCAGGATCTCCAGTAGGAGACGTTTGAAGTCTCCTCCACACTCAGAGCTCAGAGCTTCTTTCAGAGGAACATCATACTTCTCCAGGTACATCTCCTTAATGGTCTCCAG

Function

NR:

description
PREDICTED: annexin A13

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2437233 True 1447 lncRNA 0.37 2 34911110 34912582

Neighbor

gene id symbol gene type direction distance location
si:ch211-252f13.5 LOC106598121 coding upstream 7692 34898527 ~ 34903418 (+)
LOC110509073 LOC106568697 coding upstream 43787 34824969 ~ 34867323 (+)
LOC110509077 NA coding upstream 96391 34811894 ~ 34814719 (+)
LOC110509069 NA coding upstream 107525 34796732 ~ 34803585 (+)
LOC110509070 LOC106598580 coding upstream 141782 34766774 ~ 34769328 (+)
LOC110509083 LOC106598110 coding downstream 23944 34936526 ~ 34939328 (+)
LOC110509084 rab18 coding downstream 166916 35079498 ~ 35088111 (+)
trnak-uuu-132 NA coding downstream 220206 35132788 ~ 35132860 (+)
trnak-uuu-133 NA coding downstream 221521 35134103 ~ 35134175 (+)
trnak-uuu-134 NA coding downstream 223080 35135662 ~ 35135734 (+)
G2131536 NA non-coding upstream 7010 34903795 ~ 34904100 (+)
G2131510 NA non-coding upstream 64701 34845298 ~ 34846409 (+)
G2131461 NA non-coding upstream 68888 34769657 ~ 34842222 (+)
G2131540 NA non-coding downstream 854 34913436 ~ 34945186 (+)
G2131551 NA non-coding downstream 21822 34934404 ~ 35018056 (+)
G2131587 NA non-coding downstream 83756 34996338 ~ 35033590 (+)
G2131588 NA non-coding downstream 84567 34997149 ~ 34998834 (+)
G2131922 NA non-coding downstream 146437 35059019 ~ 35059282 (+)
G2131426 NA other upstream 127692 34702206 ~ 34783418 (+)
G2131416 NA other upstream 223470 34687271 ~ 34687640 (+)
G2131383 NA other upstream 306157 34603485 ~ 34604953 (+)
LOC110508236 LOC106598267 other upstream 537100 34352592 ~ 34409491 (+)
G2130749 LOC106598333 other upstream 842016 34038792 ~ 34069094 (+)
G2131933 NA other downstream 179117 35091699 ~ 35093034 (+)
G2132291 NA other downstream 787264 35699846 ~ 35700235 (+)
LOC110508289 LOC106597230 other downstream 1060857 35973386 ~ 35975132 (+)
G2132519 LOC100380659 other downstream 1426512 36339094 ~ 36364994 (+)
G2132611 LOC100380659 other downstream 1452974 36365556 ~ 36369967 (+)

Expression


Co-expression Network