G2132265


Basic Information

Item Value
gene id G2132265
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 35633644 ~ 35635867 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2438093
CACCAAATACAGCTGCTGAACTCAAAACACCACCTGGGGTGTCTTCAGTGAGGTGGAACATTAGTCGCAGATAGAAAAGTAATGAAAAGAACATGATACCTCTTTTTAATGTGTGTTGTATTATTGTCTGATAGCCAGGACAGTTAGGCATATAGGAGACTGGGAGATTGGTCATGAAGAAAGGCATAGAGATAGATATGTGTGGTCCGGAGATGAGAATACGGTACTGCTCAACCAGACTCCAGCACATGGCAGACATCGTATCTGTTCTACGCAATATGTTTCTATCTGAATGTTCTGTAACCTTGCAGCCTCCTGACAAACTTGTTTATTGAATGACGGAGAAGCAGACATTTGTATTCGTCGTCAAAAAACTGGCCAACACCAATtcataacacaaacacactgattacaagcatttcgctacactcacaataacatctgctaaccagttgtatgtgaccaataaattagatttgattaacacatacagtacaacactatctctgattatcacatacagtacaacactatctctgattatcacatacagtacaacactatctctgattaacacatacagtacaacactatctctgattaacacatacagtacaacactatctctgattatcacatacagtacaacactatctctgattatcacatacagtacaacactatctctgattatcacatacagtacaacactatctctgattatcacatacagtacaacactatctctgattaacacatacagtacaacactatctctgattaacacatacagtacaacactatctctgattaacacatacagtacaacactatctctgattaacacatacagtacaacactatctctgattatcacatacagtacaacactatctctgattaacacatacagtacaacactatctctgattatcacatacagtacaacactatctctgattaacacatacaatacaacactatctctgattaacacatacagtacaacactatctctgattaacacatacaatacaacactatctctgattaacacatacagtacaacactatctCTGATTATCAATATGTAGGCTACCTTCCTCCAGTACTGCTAACTGAAGCTGGCTTGCTTTAGAACACCCCGAGTAGCTTCCTGCATAGTAAACCTTTCTGGTCTTGATGAAAATCCAACCGACTGCATTGCCTATTACGACTGATATTTATCATATTTATGGCACGACTCCCCTTTTTCCAAGAACATACTGTAGGCTTTCtcaaatggaaatgtgtttttggacCAATAAACAAGTGAACCGAAATATATTTCAGAAGAGCTGACTCGTAAAg

Function

NR:

description
PREDICTED: translation initiation factor IF-2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2438093 True 1350 lncRNA 0.37 2 35633644 35635867

Neighbor

gene id symbol gene type direction distance location
LOC110509087 LOC106588083 coding upstream 248719 35372225 ~ 35384925 (+)
trnak-uuu-285 NA coding upstream 266708 35366864 ~ 35366936 (+)
trnak-uuu-284 NA coding upstream 268262 35365310 ~ 35365382 (+)
trnak-uuu-283 NA coding upstream 269821 35363751 ~ 35363823 (+)
trnak-uuu-282 NA coding upstream 271380 35362192 ~ 35362264 (+)
LOC110509092 LOC106597187 coding downstream 216683 35852550 ~ 35864073 (+)
LOC110508289 LOC106597230 coding downstream 337519 35973386 ~ 35975132 (+)
LOC110509094 LOC106597143 coding downstream 349648 35985515 ~ 35998946 (+)
riok1 riok1 coding downstream 392680 36028547 ~ 36039262 (+)
LOC110509101 LOC106597086 coding downstream 472759 36108626 ~ 36178080 (+)
G2132255 NA non-coding upstream 18988 35614088 ~ 35614656 (+)
G2132238 NA non-coding upstream 41151 35592132 ~ 35592493 (+)
G2132235 NA non-coding upstream 44242 35589192 ~ 35589402 (+)
G2132188 NA non-coding upstream 47580 35585844 ~ 35586064 (+)
G2132180 LOC106597204 non-coding upstream 58200 35575222 ~ 35575444 (+)
G2132273 NA non-coding downstream 28498 35664365 ~ 35665430 (+)
G2132287 tnk2 non-coding downstream 46403 35682270 ~ 35685178 (+)
G2132292 NA non-coding downstream 67946 35703813 ~ 35704307 (+)
G2132293 LOC106596996 non-coding downstream 69376 35705243 ~ 35705520 (+)
G2132294 NA non-coding downstream 70531 35706398 ~ 35706707 (+)
G2131933 NA other upstream 540610 35091699 ~ 35093034 (+)
G2131426 NA other upstream 850226 34702206 ~ 34783418 (+)
G2131416 NA other upstream 946004 34687271 ~ 34687640 (+)
G2131383 NA other upstream 1028691 34603485 ~ 34604953 (+)
LOC110508236 LOC106598267 other upstream 1259634 34352592 ~ 34409491 (+)
G2132291 NA other downstream 63979 35699846 ~ 35700235 (+)
G2132519 LOC100380659 other downstream 703227 36339094 ~ 36364994 (+)
G2132611 LOC100380659 other downstream 729689 36365556 ~ 36369967 (+)
LOC110509112 LOC106597339 other downstream 886887 36522754 ~ 36528580 (+)

Expression


Co-expression Network