G2132273


Basic Information

Item Value
gene id G2132273
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 35664365 ~ 35665430 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2438105
GGCTTTGTGAACTTTGTCCTCTGCTAAAACACAGTAGAGCCTGGGAGGGCGGGCGGCGCAGCAGAAAGATGCTGACCTCGCTAAAACAAGCCTGTCCAATCCGAGGAGCTTAGCAAAGCTCACATACAGTAGGGGAGTGCTCCCCTGATTCATATGTCAGTAATGACACAAAAGAGGTCAGCCTAGTTGGTCAATGGTGTATTGTGGCAGTGATATAACTGAATCGGGGAGACCAGCAGTGAAAAAGAGGATGTTTTTCCTTCAGTGTTGGGTATAGGGTAGGAAACAGCAGACACCATGGTCCCTTTAAGAGTATGGTTCCACTACCTGTATTCTAAGTCGACTTCTACTCATATTCGGTGGTAGAACGGGAGGCTCCTCAGTGGAGGCTAGCCTCTAGGTCCTCAGTGGAGGCTAGCTTCCAGGTCCACAGTGTAGAGGCTAGCCTCCTGGTCCTCAGTGTGGAGGCTGGCCTCCTGGTCTTCAGTGTGGAGGCTAGCCCCCCTGGTCCTCAGTGTGGAGGCTAACCCCCTGGTCCTCAGTGTCGAAgctgctgaggggaggacggctcataataatgtctggaatggagtcaatggaatggtatcaaccacatggaaaccacctATCCAGGTCTCAGTGTACAGTAGGCAAGACTGCAGCCATGGCCCATCACACAGTCAAATGTACCCCAGGTCCACACTCAAATCCCCATCTTCTTAAGGGGCGTGTCTGGCAAGTCAGAAAAGAGGGATGGTAGCAGACTCCGTCCCCTCAAAGACAGATGACAGATTTAAAAAAGTTCTGCTGTTGCTCCTAGCATCGGT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2438105 True 827 lncRNA 0.52 4 35664365 35665430

Neighbor

gene id symbol gene type direction distance location
LOC110509087 LOC106588083 coding upstream 279440 35372225 ~ 35384925 (+)
trnak-uuu-285 NA coding upstream 297429 35366864 ~ 35366936 (+)
trnak-uuu-284 NA coding upstream 298983 35365310 ~ 35365382 (+)
trnak-uuu-283 NA coding upstream 300542 35363751 ~ 35363823 (+)
trnak-uuu-282 NA coding upstream 302101 35362192 ~ 35362264 (+)
LOC110509092 LOC106597187 coding downstream 187120 35852550 ~ 35864073 (+)
LOC110508289 LOC106597230 coding downstream 307956 35973386 ~ 35975132 (+)
LOC110509094 LOC106597143 coding downstream 320085 35985515 ~ 35998946 (+)
riok1 riok1 coding downstream 363117 36028547 ~ 36039262 (+)
LOC110509101 LOC106597086 coding downstream 443196 36108626 ~ 36178080 (+)
G2132265 NA non-coding upstream 28498 35633644 ~ 35635867 (+)
G2132255 NA non-coding upstream 49709 35614088 ~ 35614656 (+)
G2132238 NA non-coding upstream 71872 35592132 ~ 35592493 (+)
G2132235 NA non-coding upstream 74963 35589192 ~ 35589402 (+)
G2132188 NA non-coding upstream 78301 35585844 ~ 35586064 (+)
G2132287 tnk2 non-coding downstream 16840 35682270 ~ 35685178 (+)
G2132292 NA non-coding downstream 38383 35703813 ~ 35704307 (+)
G2132293 LOC106596996 non-coding downstream 39813 35705243 ~ 35705520 (+)
G2132294 NA non-coding downstream 40968 35706398 ~ 35706707 (+)
G2132296 NA non-coding downstream 43810 35709240 ~ 35709528 (+)
G2131933 NA other upstream 571331 35091699 ~ 35093034 (+)
G2131426 NA other upstream 880947 34702206 ~ 34783418 (+)
G2131416 NA other upstream 976725 34687271 ~ 34687640 (+)
G2131383 NA other upstream 1059412 34603485 ~ 34604953 (+)
LOC110508236 LOC106598267 other upstream 1290355 34352592 ~ 34409491 (+)
G2132291 NA other downstream 34416 35699846 ~ 35700235 (+)
G2132519 LOC100380659 other downstream 673664 36339094 ~ 36364994 (+)
G2132611 LOC100380659 other downstream 700126 36365556 ~ 36369967 (+)
LOC110509112 LOC106597339 other downstream 857324 36522754 ~ 36528580 (+)

Expression


Co-expression Network