G2132296


Basic Information

Item Value
gene id G2132296
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 35709240 ~ 35709528 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2438129
GTGGTCAATGGTTTGACCAAAACAGATGTTGGAGAGAGAGTGCTTTTGGTCATTtttccatgttgtcatggcttgAACTTTGAAGCCACTGATACTGTTCCCCATGTGATCACAAGGAACTCCCTCGTCCTCTGTCtgttcctctttctattctgacaCCTTACTGTGAAACTATACCGCAAgccccctccctctgttcctctatcTATTCTAACACTTTACTGTGAAACTACACCGCAAgccccctccctctgttcctctatcTATTCTAACACTTTACTGTGAAACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2438129 True 289 lncRNA 0.45 1 35709240 35709528

Neighbor

gene id symbol gene type direction distance location
LOC110509087 LOC106588083 coding upstream 324315 35372225 ~ 35384925 (+)
trnak-uuu-285 NA coding upstream 342304 35366864 ~ 35366936 (+)
trnak-uuu-284 NA coding upstream 343858 35365310 ~ 35365382 (+)
trnak-uuu-283 NA coding upstream 345417 35363751 ~ 35363823 (+)
trnak-uuu-282 NA coding upstream 346976 35362192 ~ 35362264 (+)
LOC110509092 LOC106597187 coding downstream 143022 35852550 ~ 35864073 (+)
LOC110508289 LOC106597230 coding downstream 263858 35973386 ~ 35975132 (+)
LOC110509094 LOC106597143 coding downstream 275987 35985515 ~ 35998946 (+)
riok1 riok1 coding downstream 319019 36028547 ~ 36039262 (+)
LOC110509101 LOC106597086 coding downstream 399098 36108626 ~ 36178080 (+)
G2132294 NA non-coding upstream 2533 35706398 ~ 35706707 (+)
G2132293 LOC106596996 non-coding upstream 3720 35705243 ~ 35705520 (+)
G2132292 NA non-coding upstream 4933 35703813 ~ 35704307 (+)
G2132287 tnk2 non-coding upstream 24062 35682270 ~ 35685178 (+)
G2132273 NA non-coding upstream 43810 35664365 ~ 35665430 (+)
G2132298 LOC106596996 non-coding downstream 1133 35710661 ~ 35710942 (+)
G2132303 tnk2 non-coding downstream 10171 35719699 ~ 35720035 (+)
G2132307 NA non-coding downstream 14775 35724303 ~ 35724539 (+)
G2132315 NA non-coding downstream 16765 35726293 ~ 35726501 (+)
G2132317 NA non-coding downstream 18087 35727615 ~ 35728422 (+)
G2132291 NA other upstream 9005 35699846 ~ 35700235 (+)
G2131933 NA other upstream 616206 35091699 ~ 35093034 (+)
G2131426 NA other upstream 925822 34702206 ~ 34783418 (+)
G2131416 NA other upstream 1021600 34687271 ~ 34687640 (+)
G2131383 NA other upstream 1104287 34603485 ~ 34604953 (+)
G2132519 LOC100380659 other downstream 629566 36339094 ~ 36364994 (+)
G2132611 LOC100380659 other downstream 656028 36365556 ~ 36369967 (+)
LOC110509112 LOC106597339 other downstream 813226 36522754 ~ 36528580 (+)
G2133551 NA other downstream 1329125 37038653 ~ 37038924 (+)

Expression


Co-expression Network