G2132779


Basic Information

Item Value
gene id G2132779
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 35757338 ~ 35758059 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2438680
GTGTGTTTTCAGTAGTCCTCCCTGCGGACTGGGTGTGTTTTCAGTAGTCCTCCCTGTGGACTGGGTGTGTTTTCAGTAGTTCTCCCTGTGGACTGGGTGTGTTTTCAGTAGTCCTCCCTGTGGACTGGGTGTGTTTTCAGTAGTTCTCCCTGTGGACTGGGTGTGTTTTCAGTAGTCCTCCCTGTGGACTGGGTGTGTTTTCAGTAGTTCTCCCTGTGGACTGGGTGTGTTTTCAGTAGTCCTCCCTGTGGACTGGGTGTGTTTTCAGTAGTCCTCCCTGTGGACTGGGTGTGTTTTCAGTAGTCCTCCCTGTGGACTGGGTGTGTTTGTGCTGCATGTTTAAGTCATTGGTTTCATTTTCACCTCCCCCTCCAGTACACTGTGTCTAGATAGTGTTGTTTTAAGTGCGTGTCTCTTTGAAGTGTTCTTAAAAGGATTCCCCAAAACATATTTACCTGTTTTCACGTAGCCTACTCCACACTACTCTACTCACCATGTGTTTTATAGTCTGCTATATAATATGCTTCAGGATTAATTTTGCTGGCTTCAATCCAGTTGTTTTGTCAGTTGGACACTGACATGTTTTCCAGGACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2438680 True 594 lncRNA 0.47 2 35757338 35758059

Neighbor

gene id symbol gene type direction distance location
LOC110509088 LOC106597204 coding downstream 181357 35516740 ~ 35575981 (-)
LOC110508240 LOC106568781 coding downstream 328039 35391006 ~ 35429299 (-)
trnaw-cca-200 NA coding downstream 390643 35366624 ~ 35366695 (-)
trnaw-cca-199 NA coding downstream 392197 35365070 ~ 35365141 (-)
trnaw-cca-198 NA coding downstream 393756 35363511 ~ 35363582 (-)
tfr1a LOC106597167 coding upstream 24090 35782149 ~ 35813447 (-)
LOC110509089 LOC106597148 coding upstream 75924 35833983 ~ 35842022 (-)
LOC110509091 LOC106597174 coding upstream 112097 35865848 ~ 35925783 (-)
rpp40 rpp40 coding upstream 244794 36002853 ~ 36013047 (-)
lyrm4 lyrm4 coding upstream 258027 36005489 ~ 36017873 (-)
G2132768 NA non-coding downstream 28234 35728762 ~ 35729104 (-)
LOC110508241 LOC106596996 non-coding downstream 36065 35663916 ~ 35780400 (-)
G2132755 NA non-coding downstream 46947 35710072 ~ 35710391 (-)
G2132754 NA non-coding downstream 48001 35709086 ~ 35709337 (-)
G2132752 NA non-coding downstream 51417 35705689 ~ 35705921 (-)
G2132785 NA non-coding upstream 8737 35766796 ~ 35767141 (-)
G2132787 NA non-coding upstream 11959 35770018 ~ 35770232 (-)
G2132788 NA non-coding upstream 13049 35771108 ~ 35771608 (-)
G2132793 NA non-coding upstream 15539 35773598 ~ 35773928 (-)
G2132794 NA non-coding upstream 16277 35774336 ~ 35775350 (-)
G2131641 NA other downstream 1239209 34516522 ~ 34518129 (-)
G2131621 NA other downstream 1271162 34485869 ~ 34486176 (-)
G2130780 LOC106598333 other downstream 1689265 34041438 ~ 34068073 (-)
G2130771 LOC106598333 other downstream 1690673 34040206 ~ 34066665 (-)
LOC118944844 riok1 other upstream 265721 36023714 ~ 36025735 (-)
G2132971 NA other upstream 466154 36224213 ~ 36225379 (-)
G2132966 NA other upstream 477456 36235515 ~ 36249775 (-)
G2133007 NA other upstream 504943 36263002 ~ 36263330 (-)

Expression


Co-expression Network