Gene
RNA
| Item | Value |
|---|---|
| gene id | G2132788 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 35771108 ~ 35771608 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2438689 | True | 226 | lncRNA | 0.38 | 3 | 35771108 | 35771608 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509088 | LOC106597204 | coding | downstream | 195127 | 35516740 ~ 35575981 (-) |
| LOC110508240 | LOC106568781 | coding | downstream | 341809 | 35391006 ~ 35429299 (-) |
| trnaw-cca-200 | NA | coding | downstream | 404413 | 35366624 ~ 35366695 (-) |
| trnaw-cca-199 | NA | coding | downstream | 405967 | 35365070 ~ 35365141 (-) |
| trnaw-cca-198 | NA | coding | downstream | 407526 | 35363511 ~ 35363582 (-) |
| tfr1a | LOC106597167 | coding | upstream | 10541 | 35782149 ~ 35813447 (-) |
| LOC110509089 | LOC106597148 | coding | upstream | 62375 | 35833983 ~ 35842022 (-) |
| LOC110509091 | LOC106597174 | coding | upstream | 98548 | 35865848 ~ 35925783 (-) |
| rpp40 | rpp40 | coding | upstream | 231245 | 36002853 ~ 36013047 (-) |
| lyrm4 | lyrm4 | coding | upstream | 244478 | 36005489 ~ 36017873 (-) |
| G2132787 | NA | non-coding | downstream | 876 | 35770018 ~ 35770232 (-) |
| G2132785 | NA | non-coding | downstream | 3967 | 35766796 ~ 35767141 (-) |
| G2132779 | NA | non-coding | downstream | 13049 | 35757338 ~ 35758059 (-) |
| G2132768 | NA | non-coding | downstream | 42004 | 35728762 ~ 35729104 (-) |
| LOC110508241 | LOC106596996 | non-coding | downstream | 49835 | 35663916 ~ 35780400 (-) |
| G2132793 | NA | non-coding | upstream | 1990 | 35773598 ~ 35773928 (-) |
| G2132794 | NA | non-coding | upstream | 2728 | 35774336 ~ 35775350 (-) |
| G2132798 | NA | non-coding | upstream | 6745 | 35778353 ~ 35778606 (-) |
| G2132812 | NA | non-coding | upstream | 48167 | 35819775 ~ 35820085 (-) |
| G2131641 | NA | other | downstream | 1252979 | 34516522 ~ 34518129 (-) |
| G2131621 | NA | other | downstream | 1284932 | 34485869 ~ 34486176 (-) |
| G2130780 | LOC106598333 | other | downstream | 1703035 | 34041438 ~ 34068073 (-) |
| G2130771 | LOC106598333 | other | downstream | 1704443 | 34040206 ~ 34066665 (-) |
| LOC118944844 | riok1 | other | upstream | 252172 | 36023714 ~ 36025735 (-) |
| G2132971 | NA | other | upstream | 452605 | 36224213 ~ 36225379 (-) |
| G2132966 | NA | other | upstream | 463907 | 36235515 ~ 36249775 (-) |
| G2133007 | NA | other | upstream | 491394 | 36263002 ~ 36263330 (-) |
