Gene
RNA
| Item | Value |
|---|---|
| gene id | G2132827 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 35848238 ~ 35848523 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2438733 | True | 286 | lncRNA | 0.41 | 1 | 35848238 | 35848523 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509089 | LOC106597148 | coding | downstream | 6216 | 35833983 ~ 35842022 (-) |
| tfr1a | LOC106597167 | coding | downstream | 34791 | 35782149 ~ 35813447 (-) |
| LOC110508241 | LOC106596996 | coding | downstream | 67838 | 35663916 ~ 35780400 (-) |
| LOC110509088 | LOC106597204 | coding | downstream | 272257 | 35516740 ~ 35575981 (-) |
| LOC110508240 | LOC106568781 | coding | downstream | 418939 | 35391006 ~ 35429299 (-) |
| LOC110509091 | LOC106597174 | coding | upstream | 21633 | 35865848 ~ 35925783 (-) |
| rpp40 | rpp40 | coding | upstream | 154330 | 36002853 ~ 36013047 (-) |
| lyrm4 | lyrm4 | coding | upstream | 167563 | 36005489 ~ 36017873 (-) |
| LOC118944844 | riok1 | coding | upstream | 175191 | 36023714 ~ 36025735 (-) |
| LOC110509099 | LOC106597112 | coding | upstream | 195518 | 36044041 ~ 36052176 (-) |
| G2132825 | NA | non-coding | downstream | 1872 | 35846040 ~ 35846366 (-) |
| G2132824 | NA | non-coding | downstream | 3600 | 35844366 ~ 35844638 (-) |
| G2132812 | NA | non-coding | downstream | 28153 | 35819775 ~ 35820085 (-) |
| G2132798 | NA | non-coding | downstream | 69632 | 35778353 ~ 35778606 (-) |
| G2132792 | NA | non-coding | upstream | 1959 | 35850482 ~ 35852434 (-) |
| G2132841 | NA | non-coding | upstream | 33310 | 35881833 ~ 35882121 (-) |
| G2132876 | NA | non-coding | upstream | 148344 | 35996867 ~ 35998894 (-) |
| G2132903 | NA | non-coding | upstream | 152781 | 36001304 ~ 36001673 (-) |
| G2131641 | NA | other | downstream | 1330109 | 34516522 ~ 34518129 (-) |
| G2131621 | NA | other | downstream | 1362062 | 34485869 ~ 34486176 (-) |
| G2130780 | LOC106598333 | other | downstream | 1780165 | 34041438 ~ 34068073 (-) |
| G2130771 | LOC106598333 | other | downstream | 1781573 | 34040206 ~ 34066665 (-) |
| G2132971 | NA | other | upstream | 375690 | 36224213 ~ 36225379 (-) |
| G2132966 | NA | other | upstream | 386992 | 36235515 ~ 36249775 (-) |
| G2133007 | NA | other | upstream | 414479 | 36263002 ~ 36263330 (-) |
