G2132876


Basic Information

Item Value
gene id G2132876
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 35996867 ~ 35998894 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2438807
CAGGTTCAGACCATTTATTTTCACAGCGAGTATAGATTTCATTAatctatatttttaaaaaaaaacacacgttCGGATTGTACAGCATGTATATTTATATAAGTTCAACTACAAAATAGGTCACATGTATGCAAACATGCTGTACCAGGATTTGAGTCAAGGCAGTTCACACAGTTCTTCAGAAGGGTGAGGATTATGGGATTTCGTACTTTTAAATTAATTTCGTTGCTGTACAAAAATGCAGTCAATTTCAACAACGCTTCTTGGAATCTTTCAACAGAATGAGTGAATTCTGTGTACACTAGACAAGCCTCATCATCATGCTGTGTTAACACActacaaattatatatttttttaaatacagtacatttcTTCAATGAGAAAAACGTGGAGGACATTACATTAACTAAGCTGTGGTCCAAGTGTTGAAGGCGCCTGCTAATATTTATAAATCAGCATTCAGTGAAACATGGAAGtacgttaaaaaaaaaaacatctttatttaactaggcaagtcagttaagaacaaattcttatttacaatgacagcctaacagggccaaaccaggacgacgctgggccaattctgcgccgccctatgggactcccaatcatggccagttgtgtgatacagcctggaatcaaaccagggtctgtagtgacgcctccagcactgagatgcagtgccttagacccgctgcgccactctggagcacTCGAGGTATGACATGCTTCAGGCATAATTTGGGAAAACTAAGCAAAAAGGACATGTTTTTATGAAAGAGCATCGCCTTATTGATACGCAATACCTCTTCACCTTTGCTTACAGAAAATCCCAACCGAAATACTGACTTCTATCCCttctagaagaaaaaaaatatgctAATAAAACAAGCCGACTGGTGCAGTTGCGGCGCTAACAATTTTATACATCTATGCGCGAAGGCCAAAACTGAAAGTGATAACTAAAAATCATACTATGTCCACGAAGTAGACTGCCCCGAGAAGATACTTCActtttcaataaaataaaatcaaactgTGAAACAAACCCATGAGCAATGACTCAAAAACAGACACTACTTTTGTCCAAACCATCTCCActttaaacatttaaatattcATAGACAATATAAATAATGACATTTTCCATAATTCTTTATCGAAATAGGTTGAAGGTAACAGCAGTTGTCCAGATATCGGGATATTGCGATGACATCTGTTACCCCGAGCTCTGCTACTTTTATAAATCCAGTGAAACAAGGAATATGGCCAAATGATTGGTGAGGCCACAAAAACATTGGCCAAGTCAGAATTCATATATAAAAAGACAAATACAAACAAACTGTAGGCGAATAACGGTTTTGTTTTACAAACTCAAAAAGCTGTAcatctttttttccccccaggGCTATGACTAATGTAAATAGAATGCCTCCACAGCATTTTAGTAGTATCCTTTGctcaatgcaacaacaaaaaaacaaggtGAGATATGCTGAAGCTGCAAAAGTCCTATATCCATGGTACTGAGTGGTGAGATTAAAGGCTATTCTCACTGATAATCGCTTCAGATCAGAACACACATTTTGACATTAGAAAATGGGAGTAAAGAACAAGGCACTGCTTTTAGCTAGTACCCTAGCCTAGCCTCGTCACAACTGAGCCTTGAACCGCGTACCCTAGCCTCGTCACAACTGAGCCTTGAACCGTGTACCCTAGCCTCGTCACAAATGAGCCTTGAACCGTGTACCCTAGCCTCGTCACAACTGAGCCTTGAACCGTGTACGCTAGCCTCGTCACAACTGAGCCTTGAACCGTGTACCCTAGCCTCATCACAACTGAGCCTTGAACCGTGTACCTTAGCCTCGTCACAACTGAGCCTTAAACCGTGTACCTTAGCCTCGTCACAACGGAGCCTCGAACTGTGTACCCTAGCCTCGTCACAACTGCATTCATTGTATCAGAATCTTGTAATTGTCTCTCCTTTGCGTGTATGTTTCATGGATGGAATAAATCAGGAGTTG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2438807 True 2028 lncRNA 0.40 1 35996867 35998894

Neighbor

gene id symbol gene type direction distance location
LOC110509091 LOC106597174 coding downstream 71084 35865848 ~ 35925783 (-)
LOC110509089 LOC106597148 coding downstream 154845 35833983 ~ 35842022 (-)
tfr1a LOC106597167 coding downstream 183420 35782149 ~ 35813447 (-)
LOC110508241 LOC106596996 coding downstream 216467 35663916 ~ 35780400 (-)
LOC110509088 LOC106597204 coding downstream 420886 35516740 ~ 35575981 (-)
rpp40 rpp40 coding upstream 3959 36002853 ~ 36013047 (-)
lyrm4 lyrm4 coding upstream 17192 36005489 ~ 36017873 (-)
LOC118944844 riok1 coding upstream 24820 36023714 ~ 36025735 (-)
LOC110509099 LOC106597112 coding upstream 45147 36044041 ~ 36052176 (-)
LOC110509100 LOC106597103 coding upstream 54524 36053418 ~ 36064572 (-)
G2132841 NA non-coding downstream 114746 35881833 ~ 35882121 (-)
G2132792 NA non-coding downstream 144433 35850482 ~ 35852434 (-)
G2132827 NA non-coding downstream 148344 35848238 ~ 35848523 (-)
G2132825 NA non-coding downstream 150501 35846040 ~ 35846366 (-)
G2132903 NA non-coding upstream 2410 36001304 ~ 36001673 (-)
G2132910 NA non-coding upstream 20039 36018933 ~ 36019457 (-)
G2132911 NA non-coding upstream 21244 36020138 ~ 36026003 (-)
G2132917 NA non-coding upstream 37765 36036659 ~ 36037337 (-)
G2131641 NA other downstream 1478738 34516522 ~ 34518129 (-)
G2131621 NA other downstream 1510691 34485869 ~ 34486176 (-)
G2130780 LOC106598333 other downstream 1928794 34041438 ~ 34068073 (-)
G2130771 LOC106598333 other downstream 1930202 34040206 ~ 34066665 (-)
G2132971 NA other upstream 225319 36224213 ~ 36225379 (-)
G2132966 NA other upstream 236621 36235515 ~ 36249775 (-)
G2133007 NA other upstream 264108 36263002 ~ 36263330 (-)

Expression


Co-expression Network