G2132910


Basic Information

Item Value
gene id G2132910
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 36018933 ~ 36019457 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2438841
gagagattttggaggtagggattgctgagagattttgctagagagattttgctgaggtcattgctgagcgattgtttgtgatagagtttttgctagaggttgattttgctgggagttcattgctgagagtgggtatgttctgtgagtttgttgctcagagcTCACAGCTCATGATGAGGGGCGAACTTCATCAACATTAGATATGATGGTTATTTGATGTCCTCTGTTTCTCAGTTTGTTTGtaaaattgtttaatattctgtttcatttgttcccaggggggaaggggaaggcaccttgggagtgcttaggcaagaggcccgcgggcatacatatacccgtagtatattcactgtctaggcacactaggtaagacctgggttgaccactccctgtattttggttagggcaccaggtggtgctaaattaggtaagtagtgggtaggcaggtaagataggagaggggggctttgagatttactttctttgctttggttccgtccagcccttttccccatattaccg

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2438841 True 525 lncRNA 0.45 1 36018933 36019457

Neighbor

gene id symbol gene type direction distance location
lyrm4 lyrm4 coding downstream 1060 36005489 ~ 36017873 (-)
rpp40 rpp40 coding downstream 5886 36002853 ~ 36013047 (-)
LOC110509091 LOC106597174 coding downstream 93150 35865848 ~ 35925783 (-)
LOC110509089 LOC106597148 coding downstream 176911 35833983 ~ 35842022 (-)
tfr1a LOC106597167 coding downstream 205486 35782149 ~ 35813447 (-)
LOC118944844 riok1 coding upstream 4257 36023714 ~ 36025735 (-)
LOC110509099 LOC106597112 coding upstream 24584 36044041 ~ 36052176 (-)
LOC110509100 LOC106597103 coding upstream 33961 36053418 ~ 36064572 (-)
fastk LOC106597078 coding upstream 173312 36192769 ~ 36218674 (-)
LOC118944824 NA coding upstream 210598 36230055 ~ 36232160 (-)
G2132903 NA non-coding downstream 17260 36001304 ~ 36001673 (-)
G2132876 NA non-coding downstream 20039 35996867 ~ 35998894 (-)
G2132841 NA non-coding downstream 136812 35881833 ~ 35882121 (-)
G2132792 NA non-coding downstream 166499 35850482 ~ 35852434 (-)
G2132911 NA non-coding upstream 681 36020138 ~ 36026003 (-)
G2132917 NA non-coding upstream 17202 36036659 ~ 36037337 (-)
G2132923 NA non-coding upstream 22077 36041534 ~ 36041826 (-)
G2132934 NA non-coding upstream 58019 36077476 ~ 36077703 (-)
G2131641 NA other downstream 1500804 34516522 ~ 34518129 (-)
G2131621 NA other downstream 1532757 34485869 ~ 34486176 (-)
G2130780 LOC106598333 other downstream 1950860 34041438 ~ 34068073 (-)
G2130771 LOC106598333 other downstream 1952268 34040206 ~ 34066665 (-)
G2132971 NA other upstream 204756 36224213 ~ 36225379 (-)
G2132966 NA other upstream 216058 36235515 ~ 36249775 (-)
G2133007 NA other upstream 243545 36263002 ~ 36263330 (-)
LOC110509111 LOC106597319 other upstream 537043 36526794 ~ 36557532 (-)

Expression


Co-expression Network