Gene
RNA
| Item | Value |
|---|---|
| gene id | G2132992 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 36157228 ~ 36158288 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2438969 | False | 374 | lncRNA | 0.57 | 3 | 36157228 | 36158288 |
| TU2438971 | True | 283 | lncRNA | 0.55 | 2 | 36157228 | 36157789 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509100 | LOC106597103 | coding | downstream | 92656 | 36053418 ~ 36064572 (-) |
| LOC110509099 | LOC106597112 | coding | downstream | 105052 | 36044041 ~ 36052176 (-) |
| LOC118944844 | riok1 | coding | downstream | 131493 | 36023714 ~ 36025735 (-) |
| lyrm4 | lyrm4 | coding | downstream | 139355 | 36005489 ~ 36017873 (-) |
| rpp40 | rpp40 | coding | downstream | 144181 | 36002853 ~ 36013047 (-) |
| fastk | LOC106597078 | coding | upstream | 34481 | 36192769 ~ 36218674 (-) |
| LOC118944824 | NA | coding | upstream | 71767 | 36230055 ~ 36232160 (-) |
| LOC118936612 | NA | coding | upstream | 77210 | 36235498 ~ 36240339 (-) |
| LOC110509104 | NA | coding | upstream | 85373 | 36243661 ~ 36245981 (-) |
| LOC110508243 | LOC100380659 | coding | upstream | 180797 | 36339085 ~ 36391023 (-) |
| G2132934 | NA | non-coding | downstream | 79525 | 36077476 ~ 36077703 (-) |
| G2132923 | NA | non-coding | downstream | 115402 | 36041534 ~ 36041826 (-) |
| G2132917 | NA | non-coding | downstream | 119891 | 36036659 ~ 36037337 (-) |
| G2132911 | NA | non-coding | downstream | 131225 | 36020138 ~ 36026003 (-) |
| G2132969 | NA | non-coding | upstream | 38561 | 36196849 ~ 36197432 (-) |
| G2132978 | NA | non-coding | upstream | 76180 | 36234468 ~ 36243185 (-) |
| G2133005 | NA | non-coding | upstream | 92088 | 36250376 ~ 36255942 (-) |
| G2133006 | NA | non-coding | upstream | 99449 | 36257737 ~ 36258004 (-) |
| G2133009 | NA | non-coding | upstream | 108956 | 36267244 ~ 36267598 (-) |
| G2131641 | NA | other | downstream | 1639099 | 34516522 ~ 34518129 (-) |
| G2131621 | NA | other | downstream | 1671052 | 34485869 ~ 34486176 (-) |
| LOC110509052 | LOC106598333 | other | downstream | 2098958 | 34038788 ~ 34058344 (-) |
| G2132971 | NA | other | upstream | 65925 | 36224213 ~ 36225379 (-) |
| G2132966 | NA | other | upstream | 77227 | 36235515 ~ 36249775 (-) |
| G2133007 | NA | other | upstream | 104714 | 36263002 ~ 36263330 (-) |
| LOC110509111 | LOC106597319 | other | upstream | 398212 | 36526794 ~ 36557532 (-) |
| LOC110509127 | LOC106596915 | other | upstream | 1608430 | 37766370 ~ 37996222 (-) |
