G2132969



Basic Information


Item Value
gene id G2132969
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 36196849 ~ 36197432 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2438946
GAAAAAAGTGCATTTTATTGGAGGGTTTGACCAGATGTTTCAATGGAGGGAAAGCAGCAACGGTCCTCCCTCTGCACGGACTGTCAGAGACTCATGGACAAAAAACGGCAAACTCCTCAATATACCCCTCCAAGTCAGACTTGTTCAAAAAAAAAAACCTCAAATCGGCTAAAAGTTTAAAATGTCTTTCtcaaagtttaaaaaataatgaaaatgttCGTAATAAcacctaatatatatataaaggcaaaaataataataatattgaacACGTAACAAAGctctgtaaatgagaacttgtcccgTTTTGAGTAAAAGTTCTCCAGGTCAACAACTGGAGGTGGAGCAAAACTCCTCCGTTTATTTAGTCTCTCATTTCTCCTTGCGAGAAAGAGGTGGGAGGAGCCAACGTGCAAGCGTTTTGATGACGCCACCATGACTGCTCCTGACTCATGAGGAAGCGTGTCCCGCACAGACCCTCCTCTTTTGGggggggaggatgggggggtGGGGGCTAGTCTGTGTCTGAGTCACTGCTGTCCTCTGAGGAAGAGCTGCTGGAGCCCTCAGATTGGTCGTCGTCA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2438946 True 584 lncRNA 0.45 1 36196849 36197432

Neighbor


gene id symbol gene type direction distance location
LOC110509100 LOC106597103 coding downstream 132277 36053418 ~ 36064572 (-)
LOC110509099 LOC106597112 coding downstream 144673 36044041 ~ 36052176 (-)
LOC118944844 riok1 coding downstream 171114 36023714 ~ 36025735 (-)
lyrm4 lyrm4 coding downstream 178976 36005489 ~ 36017873 (-)
rpp40 rpp40 coding downstream 183802 36002853 ~ 36013047 (-)
LOC118944824 NA coding upstream 32623 36230055 ~ 36232160 (-)
LOC118936612 NA coding upstream 38066 36235498 ~ 36240339 (-)
LOC110509104 NA coding upstream 46229 36243661 ~ 36245981 (-)
LOC110508243 LOC100380659 coding upstream 141653 36339085 ~ 36391023 (-)
LOC118944889 LOC100380659 coding upstream 193842 36391274 ~ 36398759 (-)
G2132992 NA non-coding downstream 38561 36157228 ~ 36158288 (-)
G2132934 NA non-coding downstream 119146 36077476 ~ 36077703 (-)
G2132923 NA non-coding downstream 155023 36041534 ~ 36041826 (-)
G2132917 NA non-coding downstream 159512 36036659 ~ 36037337 (-)
G2132911 NA non-coding downstream 170846 36020138 ~ 36026003 (-)
G2132978 NA non-coding upstream 37036 36234468 ~ 36243185 (-)
G2133005 NA non-coding upstream 52944 36250376 ~ 36255942 (-)
G2133006 NA non-coding upstream 60305 36257737 ~ 36258004 (-)
G2133009 NA non-coding upstream 69812 36267244 ~ 36267598 (-)
G2133027 NA non-coding upstream 115337 36312769 ~ 36313075 (-)
G2131641 NA other downstream 1678720 34516522 ~ 34518129 (-)
G2131621 NA other downstream 1710673 34485869 ~ 34486176 (-)
LOC110509052 LOC106598333 other downstream 2138579 34038788 ~ 34058344 (-)
G2132971 NA other upstream 26781 36224213 ~ 36225379 (-)
G2132966 NA other upstream 38083 36235515 ~ 36249775 (-)
G2133007 NA other upstream 65570 36263002 ~ 36263330 (-)
LOC110509111 LOC106597319 other upstream 359068 36526794 ~ 36557532 (-)
LOC110509127 LOC106596915 other upstream 1569286 37766370 ~ 37996222 (-)

Expression



Co-expression Network