G2132978


Basic Information

Item Value
gene id G2132978
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 36234468 ~ 36243185 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2438955
GTGAAGCTATATAAacaagtgctgacaggcaactagacagacaAGAACCCACCAATACCctaggaaaatggctacctaaatatggtccccaaccagagacaacaataaacagctacctctgattgggaaccatatcaggccaccatagacctacatatacctagacttacaaaaacgaacatacccaccctagtcacaccctgacctaaccaaaatgataactaaggtcagggtgtgacagagtggttaaaacatgctaataatggtcctctgagttTATCAAAATAAGTTttgtatacctccactggtatgccatccagccctggagttctcagcctttaattgcatcaagaagtccccctctgtaatttggccttcacatgaggcTTTCTGTACaaatgttaattttacattattaataggaAGAAAATCCATACAACTAACTTTGGTTAGTGAAGATGGAAGAGACTGAAACGAAAACTGCATTTGTAGCAAGTTTCAATAAAAGAAATCTGTTGAAGATTAAATGATTTGGtgcatattccat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2438955 True 547 lncRNA 0.39 2 36234468 36243185

Neighbor

gene id symbol gene type direction distance location
LOC118944824 NA coding downstream 2308 36230055 ~ 36232160 (-)
fastk LOC106597078 coding downstream 15794 36192769 ~ 36218674 (-)
LOC110509100 LOC106597103 coding downstream 169896 36053418 ~ 36064572 (-)
LOC110509099 LOC106597112 coding downstream 182292 36044041 ~ 36052176 (-)
LOC118944844 riok1 coding downstream 208733 36023714 ~ 36025735 (-)
LOC110509104 NA coding upstream 476 36243661 ~ 36245981 (-)
LOC110508243 LOC100380659 coding upstream 95900 36339085 ~ 36391023 (-)
LOC118944889 LOC100380659 coding upstream 148089 36391274 ~ 36398759 (-)
faim2a LOC106597016 coding upstream 159384 36400409 ~ 36420016 (-)
abcf2a abcf2 coding upstream 181769 36424954 ~ 36437017 (-)
G2132969 NA non-coding downstream 37036 36196849 ~ 36197432 (-)
G2132992 NA non-coding downstream 76180 36157228 ~ 36158288 (-)
G2132934 NA non-coding downstream 156765 36077476 ~ 36077703 (-)
G2132923 NA non-coding downstream 192642 36041534 ~ 36041826 (-)
G2132917 NA non-coding downstream 197131 36036659 ~ 36037337 (-)
G2133005 NA non-coding upstream 7191 36250376 ~ 36255942 (-)
G2133006 NA non-coding upstream 14552 36257737 ~ 36258004 (-)
G2133009 NA non-coding upstream 24059 36267244 ~ 36267598 (-)
G2133027 NA non-coding upstream 69584 36312769 ~ 36313075 (-)
G2133048 NA non-coding upstream 95123 36338308 ~ 36338554 (-)
G2132971 NA other downstream 9089 36224213 ~ 36225379 (-)
lyrm4 lyrm4 other downstream 216636 36005489 ~ 36017873 (-)
G2131641 NA other downstream 1716339 34516522 ~ 34518129 (-)
G2131621 NA other downstream 1748292 34485869 ~ 34486176 (-)
G2133007 NA other upstream 19817 36263002 ~ 36263330 (-)
LOC110509111 LOC106597319 other upstream 313315 36526794 ~ 36557532 (-)
LOC110509127 LOC106596915 other upstream 1523533 37766370 ~ 37996222 (-)
G2134625 NA other upstream 1884944 38128129 ~ 38130407 (-)
G2135034 LOC106596897 other upstream 2276386 38519571 ~ 38526920 (-)

Expression


Co-expression Network