Gene
RNA
| Item | Value |
|---|---|
| gene id | G2132577 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 36258778 ~ 36259505 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC110487943 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2438463 | True | 728 | lncRNA | 0.45 | 1 | 36258778 | 36259505 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118944825 | NA | coding | upstream | 7043 | 36230059 ~ 36255133 (+) |
| ubtfl | ubf1 | coding | upstream | 61340 | 36178766 ~ 36197438 (+) |
| LOC110509101 | LOC106597086 | coding | upstream | 80698 | 36108626 ~ 36178080 (+) |
| riok1 | riok1 | coding | upstream | 219516 | 36028547 ~ 36039262 (+) |
| LOC110509094 | LOC106597143 | coding | upstream | 259955 | 35985515 ~ 35998946 (+) |
| afg3l2 | afg3l2 | coding | downstream | 54227 | 36313732 ~ 36337479 (+) |
| zgc:136930 | LOC106597301 | coding | downstream | 214627 | 36474132 ~ 36481583 (+) |
| LOC110509110 | LOC106597311 | coding | downstream | 231984 | 36491489 ~ 36495849 (+) |
| LOC110509112 | LOC106597339 | coding | downstream | 263388 | 36522754 ~ 36528580 (+) |
| LOC110509114 | LOC106597346 | coding | downstream | 310161 | 36569666 ~ 36576319 (+) |
| G2132576 | NA | non-coding | upstream | 534 | 36257804 ~ 36258244 (+) |
| G2132575 | NA | non-coding | upstream | 1059 | 36256456 ~ 36257719 (+) |
| G2132532 | NA | non-coding | upstream | 21234 | 36228680 ~ 36237544 (+) |
| G2132524 | NA | non-coding | upstream | 30178 | 36226321 ~ 36228600 (+) |
| G2132531 | NA | non-coding | downstream | 554 | 36260059 ~ 36261305 (+) |
| G2132578 | NA | non-coding | downstream | 2776 | 36262281 ~ 36262501 (+) |
| G2132523 | LOC100380659 | non-coding | downstream | 114849 | 36374354 ~ 36375612 (+) |
| G2132613 | NA | non-coding | downstream | 116395 | 36375900 ~ 36376608 (+) |
| LOC110508289 | LOC106597230 | other | upstream | 283646 | 35973386 ~ 35975132 (+) |
| G2132291 | NA | other | upstream | 558543 | 35699846 ~ 35700235 (+) |
| G2131933 | NA | other | upstream | 1165744 | 35091699 ~ 35093034 (+) |
| G2131426 | NA | other | upstream | 1475360 | 34702206 ~ 34783418 (+) |
| G2131416 | NA | other | upstream | 1571138 | 34687271 ~ 34687640 (+) |
| G2132519 | LOC100380659 | other | downstream | 79589 | 36339094 ~ 36364994 (+) |
| G2132611 | LOC100380659 | other | downstream | 106051 | 36365556 ~ 36369967 (+) |
| G2133551 | NA | other | downstream | 779148 | 37038653 ~ 37038924 (+) |
| G2134356 | NA | other | downstream | 1709598 | 37969103 ~ 37969465 (+) |
