G2132578


Basic Information

Item Value
gene id G2132578
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 36262281 ~ 36262501 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2438464
tatatatatacacacacacacacactgctcaaaaaaataaagggaacatttaaacaacacaatgtaactccaagtcaatcacacttctgtgaaatcaaactgtccacttaggatgcaacactgattgacaatacatttcacatgctgttgtgcaaatggaataaacaggtggaaattataggcaattagcaagacacccccaataaagtagtggttctgca

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2438464 True 221 lncRNA 0.36 1 36262281 36262501

Neighbor

gene id symbol gene type direction distance location
LOC118944825 NA coding upstream 10546 36230059 ~ 36255133 (+)
ubtfl ubf1 coding upstream 64843 36178766 ~ 36197438 (+)
LOC110509101 LOC106597086 coding upstream 84201 36108626 ~ 36178080 (+)
riok1 riok1 coding upstream 223019 36028547 ~ 36039262 (+)
LOC110509094 LOC106597143 coding upstream 263458 35985515 ~ 35998946 (+)
afg3l2 afg3l2 coding downstream 51231 36313732 ~ 36337479 (+)
zgc:136930 LOC106597301 coding downstream 211631 36474132 ~ 36481583 (+)
LOC110509110 LOC106597311 coding downstream 228988 36491489 ~ 36495849 (+)
LOC110509112 LOC106597339 coding downstream 260392 36522754 ~ 36528580 (+)
LOC110509114 LOC106597346 coding downstream 307165 36569666 ~ 36576319 (+)
G2132531 NA non-coding upstream 976 36260059 ~ 36261305 (+)
G2132577 NA non-coding upstream 2776 36258778 ~ 36259505 (+)
G2132576 NA non-coding upstream 4037 36257804 ~ 36258244 (+)
G2132575 NA non-coding upstream 4562 36256456 ~ 36257719 (+)
G2132523 LOC100380659 non-coding downstream 111853 36374354 ~ 36375612 (+)
G2132613 NA non-coding downstream 113399 36375900 ~ 36376608 (+)
G2132614 LOC100380659 non-coding downstream 114167 36376668 ~ 36376991 (+)
G2132615 LOC100380659 non-coding downstream 115061 36377562 ~ 36378174 (+)
LOC110508289 LOC106597230 other upstream 287149 35973386 ~ 35975132 (+)
G2132291 NA other upstream 562046 35699846 ~ 35700235 (+)
G2131933 NA other upstream 1169247 35091699 ~ 35093034 (+)
G2131426 NA other upstream 1478863 34702206 ~ 34783418 (+)
G2131416 NA other upstream 1574641 34687271 ~ 34687640 (+)
G2132519 LOC100380659 other downstream 76593 36339094 ~ 36364994 (+)
G2132611 LOC100380659 other downstream 103055 36365556 ~ 36369967 (+)
G2133551 NA other downstream 776152 37038653 ~ 37038924 (+)
G2134356 NA other downstream 1706602 37969103 ~ 37969465 (+)

Expression


Co-expression Network