G2133009



Basic Information


Item Value
gene id G2133009
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 36267244 ~ 36267598 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2438989
TGTGTGAAGTGAGTTAGTGCGATTAGAACAAGGTGcagctgtaacggttttctttaggcgaagtagagtcggaccaaaatgcagcgtggttgttattcatggttttttaatgaaggaaaactatacatgaataaactacaaaacaatgaaatgtgaaaacctaaacagtcctatctggtgcaaacacagagacaggaacaatcacccacaaacacacagtgaaacccaggctacctaaatatggtttccaatcagagacaatgactaacacctgcctctgattgagaaccatatcaggccagacatagaaatagacaaacaagacatccaacagaatgcccactcagatcacacc

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2438989 True 355 lncRNA 0.41 1 36267244 36267598
Loading

Neighbor


gene id symbol gene type direction distance location
LOC110509104 NA coding downstream 21263 36243661 ~ 36245981 (-)
LOC118936612 NA coding downstream 26905 36235498 ~ 36240339 (-)
LOC118944824 NA coding downstream 35084 36230055 ~ 36232160 (-)
fastk LOC106597078 coding downstream 48570 36192769 ~ 36218674 (-)
LOC110509100 LOC106597103 coding downstream 202672 36053418 ~ 36064572 (-)
LOC110508243 LOC100380659 coding upstream 71487 36339085 ~ 36391023 (-)
LOC118944889 LOC100380659 coding upstream 123676 36391274 ~ 36398759 (-)
faim2a LOC106597016 coding upstream 134971 36400409 ~ 36420016 (-)
abcf2a abcf2 coding upstream 157356 36424954 ~ 36437017 (-)
LOC110508244 LOC106597000 coding upstream 175625 36443223 ~ 36454287 (-)
G2133006 NA non-coding downstream 9240 36257737 ~ 36258004 (-)
G2133005 NA non-coding downstream 11302 36250376 ~ 36255942 (-)
G2132978 NA non-coding downstream 24059 36234468 ~ 36243185 (-)
G2132969 NA non-coding downstream 69812 36196849 ~ 36197432 (-)
G2132992 NA non-coding downstream 108956 36157228 ~ 36158288 (-)
G2133027 NA non-coding upstream 45171 36312769 ~ 36313075 (-)
G2133048 NA non-coding upstream 70710 36338308 ~ 36338554 (-)
G2133052 NA non-coding upstream 102946 36370544 ~ 36371153 (-)
G2133007 NA other downstream 3914 36263002 ~ 36263330 (-)
G2132966 NA other downstream 17469 36235515 ~ 36249775 (-)
G2132971 NA other downstream 41865 36224213 ~ 36225379 (-)
LOC118944844 riok1 other downstream 242043 36023714 ~ 36025735 (-)
lyrm4 lyrm4 other downstream 249412 36005489 ~ 36017873 (-)
LOC110509111 LOC106597319 other upstream 288902 36526794 ~ 36557532 (-)
LOC110509127 LOC106596915 other upstream 1499120 37766370 ~ 37996222 (-)
G2134625 NA other upstream 1860531 38128129 ~ 38130407 (-)
G2135034 LOC106596897 other upstream 2251973 38519571 ~ 38526920 (-)
G2135837 NA other upstream 2737863 39005461 ~ 39006050 (-)

Expression


G2133009 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 5.
End of interactive chart.

G2133009 Expression in each Bioproject

Bar chart with 17 bars.
G2133009 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 100.
End of interactive chart.

Co-expression Network