G2133048



Basic Information


Item Value
gene id G2133048
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 36338308 ~ 36338554 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2439030
GCAcggttcttccatggcctgcacactcagacatgtcacccattgagcatgttcgggatgctctggattgacgtgtacgacagcgtgttccagttcccgccaatatccagctactttgcacagctattgaagaggagtgggacaacattccacacgccacgatcaactctatgcgaaggaggtGTTAacctgcatgaggcaaatggtggtcacacaaccagtcagtatattttctgatccatgcccc

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2439030 True 247 lncRNA 0.51 1 36338308 36338554

Neighbor


gene id symbol gene type direction distance location
LOC110509104 NA coding downstream 92327 36243661 ~ 36245981 (-)
LOC118936612 NA coding downstream 97969 36235498 ~ 36240339 (-)
LOC118944824 NA coding downstream 106148 36230055 ~ 36232160 (-)
fastk LOC106597078 coding downstream 119634 36192769 ~ 36218674 (-)
LOC110509100 LOC106597103 coding downstream 273736 36053418 ~ 36064572 (-)
LOC110508243 LOC100380659 coding upstream 531 36339085 ~ 36391023 (-)
LOC118944889 LOC100380659 coding upstream 52720 36391274 ~ 36398759 (-)
faim2a LOC106597016 coding upstream 64015 36400409 ~ 36420016 (-)
abcf2a abcf2 coding upstream 86400 36424954 ~ 36437017 (-)
LOC110508244 LOC106597000 coding upstream 104669 36443223 ~ 36454287 (-)
G2133027 NA non-coding downstream 25233 36312769 ~ 36313075 (-)
G2133009 NA non-coding downstream 70710 36267244 ~ 36267598 (-)
G2133006 NA non-coding downstream 80304 36257737 ~ 36258004 (-)
G2133005 NA non-coding downstream 82366 36250376 ~ 36255942 (-)
G2132978 NA non-coding downstream 95123 36234468 ~ 36243185 (-)
G2133052 NA non-coding upstream 31990 36370544 ~ 36371153 (-)
G2133057 NA non-coding upstream 98691 36437245 ~ 36437444 (-)
G2133058 NA non-coding upstream 99039 36437593 ~ 36437811 (-)
G2133007 NA other downstream 74978 36263002 ~ 36263330 (-)
G2132966 NA other downstream 88533 36235515 ~ 36249775 (-)
G2132971 NA other downstream 112929 36224213 ~ 36225379 (-)
LOC118944844 riok1 other downstream 313107 36023714 ~ 36025735 (-)
lyrm4 lyrm4 other downstream 320476 36005489 ~ 36017873 (-)
LOC110509111 LOC106597319 other upstream 217946 36526794 ~ 36557532 (-)
LOC110509127 LOC106596915 other upstream 1428164 37766370 ~ 37996222 (-)
G2134625 NA other upstream 1789575 38128129 ~ 38130407 (-)
G2135034 LOC106596897 other upstream 2181017 38519571 ~ 38526920 (-)
G2135837 NA other upstream 2666907 39005461 ~ 39006050 (-)

Expression



Co-expression Network