G2132611 (LOC100380659)


Basic Information

Item Value
gene id G2132611
gene name LOC100380659
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 36365556 ~ 36369967 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2438499
AAATCCAACATAGGAGGTTCCACCTTTAATTCGGGGCAGTTTGGTAACAAAGTAAACAAACACCCTTCCATTATCACCTTCCTTTGGTTTGTTTATTTCATTTATGGATGAATATCTGAGGAGATTCAAAGATCAAACAtttaaatggagaaaaaaatacaagtgttaccTAATACTTCAGTTTAGTTCTCTCCAATAGTTGTGACGACACATCTAAATGAGAATCACTCACTTGGCAGATGCCAGAATGTTCATGCTCTGGGAGTCCTCATCATAGTCTGTTTGGATGATGAGGACTTTGTCGTCAGATGTGGAGTCAAGAAATTGCCTGATTTCTTTGAGGAAGGAATGCTCTGTGTCAAACTGTTGCAGCGAGAGAAGCTTGACGTTGCAAAGCTCTGTGATGTTCTGCAGCTGATGGATATCTGCTGCTGTGAATAGCCGGGAAAATGTTGTGACCTCTGTAAAGTGGTAATGCAACCATTCCTCCTCTTGTGTGTGAGAGGCAATGAAGTCTGCCAGGGAATGATGATTCTGCTCCTCAAAATAGATTTGCGTCAGGGACTCGGTCTCATCAGCAGATAATTTAGTCCCGTCAAGTCGAATGACAGAATCTGGAGTTGCACAGTTCAGCATGATAAGCTTGGCTTCATCCAGGACTCTCCTCTGAGTGTCAGATTCGTCAGACTCAGTTTTCATCTTCTCAGTCACTTGCAGGACCACAGAGGAGCATGTGTCTGAGTGATAGCCAATGAAGACATCATGTGGCTTGTAGCGGTCTGTCTTGGCCTGCTGACTTTTCAAGGAGACAAAGTGTTTGACCCATTCCTTTAGTTGTTCGACAATCACCGTCTGGTCCTTCTTGAGAACAGTGTTGATGTCCAGGTAGTGCTTTTCCAGACGGTTTATCAGGGGAATTGGGAACTGCTTGTAGACCACCTCTTTCTCTTCAATGACAATTAGCCGGAAGTCTTTGTGAACTCTGCACTTCACACGATGGGTTCCCAATCCAAGATCGACATACTTCTGACCCCCAAGTGAAACATAGTACTGGTTGAGAGCGTCGTAGAGACTTTCGTACAGATTCTGAAGGTTTAGAAGCACAACAGTCTGGCCAGTTTCCATGCAGATCTTCACTCGGTTGATATTTCTGCAGATCTGAGTGTACTCTTGATCCTTTGGGAAGCTGGAACCAAAGATGATCTCTGGATGGTTGTGGTCTGAGAAGAATGTCTGCTGGAGAATCTGGAGGGCTGCATAGTTTTTGGTGAGGACAAGGAGATATCGGCACTCCTCATCTTGGTAAATGGAAACAATGTTTTGTTTCACCAGATCAATAGTGCTGATGCCATCCAAATCAGTTTGAATGAATTGGCCGGTCAGCTCTTTGGTGAATATACGCACTGCGTCCACATCATCCCTTCCACTGAAGTTCCGTAGGACTGCTTCAATGATTTTACCTGTACTGGGGCTCTGCTTAGAGGCCCTGGTGATGGCGAACATCATTTTCACCAGACTATAGTAATCTCGTAGACCGAAAAACCCTTTGCCTTTCTTGCAAGTCGTCATATATGCTTGGGAGAAAGGTGTGAAGAGGTGCTTAACCTTCTCCAGAATCATCTTGTCAGATGAGCATATGCCTTTCGCACTCTCAAGTAGCTCATTTTGGTCTGGGTCACCACGGGACACAAAGAGGCCTCTGTTCATCTTGGCAGGGTCCAAGGCCCAATTGGAGATGCCAATGAATCCAACTCTCTTATGGGGCAGTGGCTCGTCATCAATGCAGCCTTCCTCCAGTAAAGGGTGCAGTGTTTTCAGAGGCATTTTTGGGGAGTCCTCTGCCAATCCAATCTCATCTAGCACAACAACAGAGATGTACTCCTCCAAATTCTTGCTCTCTTGGAAGCGGGCACATTGTCTGAATGTGTTGATGATTCCCTCTGGCGTGGAATGAGGGCTGCACTGGAAGGACACCAGGTGAACCTGTTTCAGCCTTTTGTACAGTTCAGAATGTGCAGCTTGGCCCTGCATGGCATCTGCAACCAGAGTTTTAGACAGAGATTTGGAGCTCCCAGGCTTGCCAACCAAAAACAGGGGGATTCGTAACTCGATACAGATCACCATCATGAAGACATTCTCTTTCAAAGCCTTGTTTCTTGCTATTGTCTCTCCCATTGGGACACCGCTTAGGAGAAGATCCTGCATGACTGAGATTTCCTGCTTCATCTGCTTTGGGGTGACTTGGGGAAGGAATTTGCAGATTGTGGTCTGGTATTCACCTTTTTTTTCTAGACTGGCTTGATAACATACACCAACAGCCATCAACAGTGACCAAACAACTGGATCACTGGCAGGTGAGTGTAGTTGGTCACTCCTGCTCCTTTCCTCCTGGGGTTGTTTCTGGAGGAATGCTTTTAACTCATTCTGAAACAGTGAGTGGTTGTTGTAGAACCACACAAACACTTGCATGCAGCGCTCCACATCCCTGAGACTGACAAAGCTGCATtcgtctttcctctctctcataAATCCCTGCGATGACGACAGCACATCAGTGATCATCCTGATGGATTCTCTGTTGATTGAATTTGTTTCCACAACTCTCTGTACAATCTGCTGGATGTACATTTTCTCTGTGTGATCACTGAGTTGCCCAAAGTCCCACACCAGAGGGATCATGCTTGGGGGCAACACTTGGACCCTATACACCAGCTGACGAAGAGGGATTGATCCAAGTCTTTCTTCAGTCTCTTCAGCTCGGACCCTGTACCCTAAACCAGCTGCCTCCAGCCTCTTGATCATGTCATCTGTGTGTTTCCTGTAAGGATTGCACGCAGCAATGATTTGCAGGCCAGTTTGGGAGCTGAGTTGTTGTCCTTGCACAGTGTTGTCACATAGGATCTCCTTAATGCTGCTTATTGCTTCAGTGGTATTAGCTTCATCGAAGAAAAGAACAGAATCAAAATCGTGTTTCTCTTTATTGGCAACCGCAATCTTCTCTGCCTCCCGCACCTTGTTGTAGATCATGTCAGATGTAGTTCCACCGTGAACTTTGACAAGTTTCATGTTCTCCGTGGGCGCCCCACTCCTTCTCAACTCGCACAGGAACTTGATGAGCCGTGTCTTCCCACAGCCAGTCTCCCCCATTATGATGACTGGAATGCCACACCGGAACCTCATGTGAATGGCCATCATCTTAAGTATGTTGTCGGTGGTGAGCTCATACGTTTCATCAGGGTCTGTTGGCCACGTGGTCCCCAGCACACTACATAGACGCTCAATCTTATCTGCTCGAGAAAGTTGGTCAAAGTCGATGTTAAAGGGAACTCTTTGATGTCTGAGGCCATTGTACAGGTTTTTGGTCATAATGTTTCTCTTGATTACCGCATTTGTTGACGGATTGATGGCGTCAACCCCATTTTGCTCGTTCAGCCGTAGGTGAAATCCAATGAAGGTCATGGACACATGGTCATCATTGAAGAAGATGTATGGATGCGGTTCCGATTCCCATCTCTTCCTGATGAGGAACGGGGCTAGATCTCTTTCGTTGAGTCCAGTGTCCATCGGCTGCCTCCCATGGCTCTGGTCAGCGATGCAGAGAGACGGAGTGGCAAAGTCCTTGGCCATCAAGATCATGAAGTCAACCACAAAGTTTCTGAATCCCCTAAGAGTGTCTCCAACAAACTCAAAGTTGCAGAAATCCGATGTCTCACAGTCTAGCAACTGAAGATTGAGAAATCCAGCAAAGTTCTTCAACTCTGCCCAGGATGGATCAATTATACCACAGTAGATGAAGAGCATTTGAAGACACTCTGCATGAGTTCCTTCAACTCTTTGGTAGTTGAAGCTGTCGAGATTTTCACCCCTATGGAACCGTGTTAGATACTGGTATGGTCTTTGAAAGGTCTCACTCCTGAAACACTGGTCATCCATGAGTGGGTCCTCAGTGTCCAGTACTGGATCGTCTCCAATTCTCGCTTCCAACCCCATAACCTCTTTTGGTGGACGGCAGAAGACCGTAGGAAAGACCTCAAAGAGA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2438499 True 4039 TUCP 0.46 3 36365556 36369967

Neighbor

gene id symbol gene type direction distance location
afg3l2 afg3l2 coding upstream 28077 36313732 ~ 36337479 (+)
LOC118944825 NA coding upstream 113821 36230059 ~ 36255133 (+)
ubtfl ubf1 coding upstream 168118 36178766 ~ 36197438 (+)
LOC110509101 LOC106597086 coding upstream 187476 36108626 ~ 36178080 (+)
riok1 riok1 coding upstream 326294 36028547 ~ 36039262 (+)
zgc:136930 LOC106597301 coding downstream 104165 36474132 ~ 36481583 (+)
LOC110509110 LOC106597311 coding downstream 121522 36491489 ~ 36495849 (+)
LOC110509112 LOC106597339 coding downstream 152926 36522754 ~ 36528580 (+)
LOC110509114 LOC106597346 coding downstream 199699 36569666 ~ 36576319 (+)
dsela LOC106597370 coding downstream 226132 36596099 ~ 36602659 (+)
G2132578 NA non-coding upstream 103055 36262281 ~ 36262501 (+)
G2132531 NA non-coding upstream 104251 36260059 ~ 36261305 (+)
G2132577 NA non-coding upstream 106051 36258778 ~ 36259505 (+)
G2132576 NA non-coding upstream 107312 36257804 ~ 36258244 (+)
G2132523 LOC100380659 non-coding downstream 4387 36374354 ~ 36375612 (+)
G2132613 NA non-coding downstream 5933 36375900 ~ 36376608 (+)
G2132614 LOC100380659 non-coding downstream 6701 36376668 ~ 36376991 (+)
G2132615 LOC100380659 non-coding downstream 7595 36377562 ~ 36378174 (+)
G2132616 NA non-coding downstream 9100 36379067 ~ 36379295 (+)
G2132519 LOC100380659 other upstream 562 36339094 ~ 36364994 (+)
LOC110508289 LOC106597230 other upstream 390424 35973386 ~ 35975132 (+)
G2132291 NA other upstream 665321 35699846 ~ 35700235 (+)
G2131933 NA other upstream 1272522 35091699 ~ 35093034 (+)
G2131426 NA other upstream 1582138 34702206 ~ 34783418 (+)
G2133551 NA other downstream 668686 37038653 ~ 37038924 (+)
G2134356 NA other downstream 1599136 37969103 ~ 37969465 (+)
G2134434 NA other downstream 1753429 38123396 ~ 38143819 (+)
LOC110508247 LOC106596897 other downstream 2155708 38292386 ~ 38526926 (+)

Expression


Co-expression Network