G2133057



Basic Information


Item Value
gene id G2133057
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 36437245 ~ 36437444 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2439039
ATGAGAAAATCACCAAATGTAATTATGTATTCAAGACAGACGTGAAACTATACCGAACAAAAACATTAACGCAACCTGCAactatttcaaagattttactgtgttacagttaaggaaatcagtcaattgaaataaataaattaggccctaatttattgatttcacatgactgggaatacagatatgcatcggttGGTCAA

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2439039 True 200 lncRNA 0.32 1 36437245 36437444

Neighbor


gene id symbol gene type direction distance location
abcf2a abcf2 coding downstream 228 36424954 ~ 36437017 (-)
faim2a LOC106597016 coding downstream 17229 36400409 ~ 36420016 (-)
LOC118944889 LOC100380659 coding downstream 38486 36391274 ~ 36398759 (-)
LOC110508243 LOC100380659 coding downstream 46222 36339085 ~ 36391023 (-)
LOC110509104 NA coding downstream 191264 36243661 ~ 36245981 (-)
LOC110508244 LOC106597000 coding upstream 5779 36443223 ~ 36454287 (-)
LOC110509111 LOC106597319 coding upstream 89350 36526794 ~ 36557532 (-)
LOC110509116 LOC106597376 coding upstream 361001 36798445 ~ 36958711 (-)
LOC118944834 NA coding upstream 563079 37000523 ~ 37001147 (-)
impa1 impa1 coding upstream 877167 37314611 ~ 37333488 (-)
G2133052 NA non-coding downstream 66092 36370544 ~ 36371153 (-)
G2133048 NA non-coding downstream 98691 36338308 ~ 36338554 (-)
G2133027 NA non-coding downstream 124170 36312769 ~ 36313075 (-)
G2133058 NA non-coding upstream 149 36437593 ~ 36437811 (-)
G2133040 NA non-coding upstream 1064 36438508 ~ 36438901 (-)
G2133115 NA non-coding upstream 137934 36575378 ~ 36578143 (-)
G2133134 NA non-coding upstream 171688 36609132 ~ 36609348 (-)
G2133135 NA non-coding upstream 174132 36611576 ~ 36611832 (-)
G2133007 NA other downstream 173915 36263002 ~ 36263330 (-)
G2132966 NA other downstream 187470 36235515 ~ 36249775 (-)
G2132971 NA other downstream 211866 36224213 ~ 36225379 (-)
LOC118944844 riok1 other downstream 412044 36023714 ~ 36025735 (-)
lyrm4 lyrm4 other downstream 419413 36005489 ~ 36017873 (-)
LOC110509127 LOC106596915 other upstream 1329274 37766370 ~ 37996222 (-)
G2134625 NA other upstream 1690685 38128129 ~ 38130407 (-)
G2135034 LOC106596897 other upstream 2082127 38519571 ~ 38526920 (-)
G2135837 NA other upstream 2568017 39005461 ~ 39006050 (-)

Expression


G2133057 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 4.
End of interactive chart.

G2133057 Expression in each Bioproject

Bar chart with 9 bars.
G2133057 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 20.
End of interactive chart.

Co-expression Network