G2132684


Basic Information

Item Value
gene id G2132684
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 36540406 ~ 36541413 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2438580
catTAATTAAGTTAATTACCGTGaaaccgacagttatttgcttgacaatcaccggctgacaaccTTTCGtgaccgcaacagccctaggccCACCCTGCCTATACAATGAGAAGGGAACCACTGTACTCAATCTAGGGGTGCCAGTAACCTGGAGGGTGGTACCTGAGAGGCTCGAAGACCAGGCAGAGGTGCTGCTTGTGGTAGAAGTGTCGGAAGAGGCGCAGGCAGTGGAACTTGTCGTCAGGGTCGGCATCGTTGAGTTTCTTCAGGAACTCCAGCTCCTTGAGCCCAGTCTTCTGccctgGTATAggatgtcctggatggcaaggagcactgtactgggctgtacactcTACCCTTGGTGgcgccttgtggtcggatgccaatcagttgccataccaagcggtgatgcagccagtcaagatgctctcaatggcacagctgtagaacctttttgaggatctgagggccaaaGCAAAATCTTCTCATCctcct

Function

NR:

description
PREDICTED: serine/threonine-protein kinase PRP4 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2438580 True 495 lncRNA 0.53 2 36540406 36541413

Neighbor

gene id symbol gene type direction distance location
LOC110509112 LOC106597339 coding upstream 11826 36522754 ~ 36528580 (+)
LOC110509110 LOC106597311 coding upstream 44557 36491489 ~ 36495849 (+)
zgc:136930 LOC106597301 coding upstream 58823 36474132 ~ 36481583 (+)
afg3l2 afg3l2 coding upstream 202927 36313732 ~ 36337479 (+)
LOC118944825 NA coding upstream 288671 36230059 ~ 36255133 (+)
LOC110509114 LOC106597346 coding downstream 28253 36569666 ~ 36576319 (+)
dsela LOC106597370 coding downstream 54686 36596099 ~ 36602659 (+)
trnas-uga-108 NA coding downstream 99627 36641040 ~ 36641121 (+)
trnas-cga-34 NA coding downstream 100526 36641939 ~ 36642020 (+)
trnas-uga-109 NA coding downstream 101318 36642731 ~ 36642812 (+)
G2132675 NA non-coding upstream 28961 36506589 ~ 36511445 (+)
G2132520 NA non-coding upstream 56249 36483263 ~ 36484157 (+)
G2132636 NA non-coding upstream 100210 36439996 ~ 36440196 (+)
G2132635 NA non-coding upstream 100610 36439420 ~ 36439796 (+)
G2132529 NA non-coding upstream 101555 36438526 ~ 36438851 (+)
G2132700 NA non-coding downstream 25913 36567326 ~ 36568360 (+)
G2133132 NA non-coding downstream 65512 36606925 ~ 36607179 (+)
G2133149 NA non-coding downstream 88167 36629580 ~ 36629869 (+)
G2133191 NA non-coding downstream 145542 36686955 ~ 36687528 (+)
G2133199 NA non-coding downstream 152904 36694317 ~ 36695004 (+)
G2132611 LOC100380659 other upstream 170439 36365556 ~ 36369967 (+)
G2132519 LOC100380659 other upstream 175412 36339094 ~ 36364994 (+)
LOC110508289 LOC106597230 other upstream 565274 35973386 ~ 35975132 (+)
G2132291 NA other upstream 840171 35699846 ~ 35700235 (+)
G2133551 NA other downstream 497240 37038653 ~ 37038924 (+)
G2134356 NA other downstream 1427690 37969103 ~ 37969465 (+)
G2134434 NA other downstream 1581983 38123396 ~ 38143819 (+)
LOC110508247 LOC106596897 other downstream 1984262 38292386 ~ 38526926 (+)
LOC118944840 LOC106596771 other downstream 2248129 38789495 ~ 39333323 (+)

Expression


Co-expression Network