G2133115


Basic Information

Item Value
gene id G2133115
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 36575378 ~ 36578143 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2439105
TATTTAACATTTAtttaactaggcaagtcagttaatatcTTGTTAAGAGTTAGTATATTGGTGAGTTAGTATATTGGTTAATACGTTTGGAGAACGAGTATTTTTACTCTACCATCATCGTGGCACAAATGTGAAACCATTTGAATCTAGCAGCAGCCGTCTGTAACCTACATCCTTTAGACCAGACCAGGTGAGTCTAGCAGCAACAGTCTGTAACcaggggttgggtaggttactttctaaatgtaatctgttacaagttacactacatggccaaaagtactGTACCTGTTCAAAATTGTTATCAGTAAcatggattacccaaactcattAACGTAATCTGAATGATTTCAGTTACTTTCctcttaagaggcattagaagacaacaaaaaaaaggatTTGTCAAACACATTGGTGAGTCGTCATAGTGGTCTTGTGGTCAAAACTCACTCaagtggaacaaacttaaacatGAGCCTTTTTTttatgctgaattgaatgtcattgagaaaacagaaaaggTCTCAATGTATTTTTTGCAAAACAtaatttctgaatttaaaagtaatctagTTTTTCCAAAAGTATCTTTAATtcgattacaatatttttgctggtaacgtaacttGTACCGTTTTTTGGAGAGGTAATGAGATTACACATAACTGACTACtgtaatctgttactccccaaccctgtctgTAACCTACATCATTTGGACCGGACCACTGAAAGTGTAGGTAAACAAGTGAGAACCATACAGACTCAAACAATATGTCCGCCACTGTCGTTCATTCCAGAATATCAGTCTCGTAGGTCAGTAGTTGGTAGTACGTCAGATTAGGGAAAGACGTTTCTTGGTCTTCGGCACTACCATCCGTTGACGCTGTCTCAACGATGTCCAGGGTCTCCTTAAA

Function

NR:

description
PX domain-containing protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2439105 True 917 lncRNA 0.37 2 36575378 36578143

Neighbor

gene id symbol gene type direction distance location
LOC110509111 LOC106597319 coding downstream 17846 36526794 ~ 36557532 (-)
LOC110508244 LOC106597000 coding downstream 121091 36443223 ~ 36454287 (-)
abcf2a abcf2 coding downstream 138361 36424954 ~ 36437017 (-)
faim2a LOC106597016 coding downstream 155362 36400409 ~ 36420016 (-)
LOC118944889 LOC100380659 coding downstream 176619 36391274 ~ 36398759 (-)
LOC110509116 LOC106597376 coding upstream 220302 36798445 ~ 36958711 (-)
LOC118944834 NA coding upstream 422380 37000523 ~ 37001147 (-)
impa1 impa1 coding upstream 736468 37314611 ~ 37333488 (-)
fbxl7 fbxl7 coding upstream 759382 37337525 ~ 37470844 (-)
LOC110509120 mplkip coding upstream 893313 37471456 ~ 37473548 (-)
G2133040 NA non-coding downstream 136477 36438508 ~ 36438901 (-)
G2133058 NA non-coding downstream 137567 36437593 ~ 36437811 (-)
G2133057 NA non-coding downstream 137934 36437245 ~ 36437444 (-)
G2133134 NA non-coding upstream 30989 36609132 ~ 36609348 (-)
G2133135 NA non-coding upstream 33433 36611576 ~ 36611832 (-)
G2133144 NA non-coding upstream 45041 36623184 ~ 36623559 (-)
G2133150 NA non-coding upstream 51434 36629577 ~ 36629803 (-)
G2133165 NA non-coding upstream 77026 36655169 ~ 36655396 (-)
G2133007 NA other downstream 312048 36263002 ~ 36263330 (-)
G2132966 NA other downstream 325603 36235515 ~ 36249775 (-)
G2132971 NA other downstream 349999 36224213 ~ 36225379 (-)
LOC118944844 riok1 other downstream 550177 36023714 ~ 36025735 (-)
LOC110509127 LOC106596915 other upstream 1188575 37766370 ~ 37996222 (-)
G2134625 NA other upstream 1549986 38128129 ~ 38130407 (-)
G2135034 LOC106596897 other upstream 1941428 38519571 ~ 38526920 (-)
G2135837 NA other upstream 2427318 39005461 ~ 39006050 (-)
LOC110509145 ankrd12 other upstream 3225652 39778552 ~ 39829207 (-)

Expression


Co-expression Network