G2133191


Basic Information

Item Value
gene id G2133191
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 36686955 ~ 36687528 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2439183
GGACTTGTCCAGTGATTCAAGTGCTCGGAATactttttgtctttgtctttgtgtgAGCTAATTGAGAAAGTTgtgatggccgagtggttaatACGTGATTTGGCGCAATAAGATCAATATGTCGTGCCATCAAGTTTACCATTTTACACCAATGATGTCTGTTTCCAAATCCCCAATCCCTATAACTGTTCCAACAGCTGCAATGGCCGATTCTTTAGACGTTGGACCTGAATTTCACTGGGGTCTCCCCACCCATGTTCTTACCTTGCTCGAAGCGTATAGCCCACTTCTGCtttctcctcatcactttccTTAGATTCCTACTGCTGCGATGGCCAAGTGGTTTAAGCTTTGCAAATGAACTCCAGTGTTGTCTCCCTGTACAGTTTTTAGAACTGCTTGCATCGCAttgacaaaccagtctttatttgtAAAATAGCATTGGTGACTTGATATTGATGAAGTGCTTAATGCatagacttgtcctttgattcaagtgctcagaatatgtattCCTTGAATAAcagttcaaataggctcttcagtaGACAGTCTcgtctttacagaagtaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2439183 True 574 lncRNA 0.41 1 36686955 36687528

Neighbor

gene id symbol gene type direction distance location
trnas-cga-49 NA coding upstream 312 36686562 ~ 36686643 (+)
trnas-cga-48 NA coding upstream 1906 36684968 ~ 36685049 (+)
trnas-cga-47 NA coding upstream 3494 36683380 ~ 36683461 (+)
trnas-uga-129 NA coding upstream 5082 36681792 ~ 36681873 (+)
trnas-uga-128 NA coding upstream 6245 36680629 ~ 36680710 (+)
trnas-uga-130 NA coding downstream 52 36687580 ~ 36687661 (+)
trnas-cga-50 NA coding downstream 211 36687739 ~ 36687820 (+)
LOC118944833 NA coding downstream 289646 36977174 ~ 36982260 (+)
c28h7orf25 cssa03h7orf25 coding downstream 750504 37438032 ~ 37442898 (+)
LOC110509119 rala coding downstream 760211 37447739 ~ 37470801 (+)
G2133149 NA non-coding upstream 57086 36629580 ~ 36629869 (+)
G2133132 NA non-coding upstream 79776 36606925 ~ 36607179 (+)
G2132700 NA non-coding upstream 118595 36567326 ~ 36568360 (+)
G2132684 NA non-coding upstream 145542 36540406 ~ 36541413 (+)
G2132675 NA non-coding upstream 175510 36506589 ~ 36511445 (+)
G2133199 NA non-coding downstream 6789 36694317 ~ 36695004 (+)
G2133229 NA non-coding downstream 34788 36722316 ~ 36722590 (+)
G2133231 NA non-coding downstream 39589 36727117 ~ 36727418 (+)
G2133247 NA non-coding downstream 72331 36759859 ~ 36760060 (+)
G2133251 NA non-coding downstream 82886 36770414 ~ 36770618 (+)
LOC110509112 LOC106597339 other upstream 161540 36522754 ~ 36528580 (+)
G2132611 LOC100380659 other upstream 316988 36365556 ~ 36369967 (+)
G2132519 LOC100380659 other upstream 321961 36339094 ~ 36364994 (+)
LOC110508289 LOC106597230 other upstream 711823 35973386 ~ 35975132 (+)
G2132291 NA other upstream 986720 35699846 ~ 35700235 (+)
G2133551 NA other downstream 351125 37038653 ~ 37038924 (+)
G2134356 NA other downstream 1281575 37969103 ~ 37969465 (+)
G2134434 NA other downstream 1435868 38123396 ~ 38143819 (+)
LOC110508247 LOC106596897 other downstream 1838147 38292386 ~ 38526926 (+)
LOC118944840 LOC106596771 other downstream 2102014 38789495 ~ 39333323 (+)

Expression


Co-expression Network