G2133199


Basic Information

Item Value
gene id G2133199
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 36694317 ~ 36695004 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2439191
ACATAGTAAACTGTATACAACACATACATTTGTGGGTGTCCCTCTCAACTGGCATGTCAAGCCCTCACCCTCAAGCGTAACACAATCATCCACAAAGGATATAATTCATTTCTTGGGCTCTTTGGCCCCACAGGAATGATGGTGCTTCACTCTTAGGTTCGGGGCAAGTTCATTATCTGTGACTTGTAAGGGAGAGGACTTGAATATTGGAACTTGAACATTACATGAGAGTTAAAGGTTCATTAAATCAGTGCCAATAAGGCCATGTATTGACATTAATAGTCCACCATCATAGTATAGTCCACCATCATAGTATAGTGCACCATCATAGTATAGTGCACCGTCATAGTATAGTGCACCATCATaaatgtatagtatagggtcCCATCATAGTATAGTGCACCATCATAGTATAGTGCACCATCATAGTATAGTGCACCATCATAGTATACTGCACCATCATAGTGTAGTGCACCATCATAGTATAGTCCACCATCATAAATGTATAGTACAGTCCACCATCATAAATGTATAGTATAGTGCACCATCAtaaatgtatagtat

Function

NR:

description
PREDICTED: uncharacterized protein LOC109055576

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2439191 True 564 lncRNA 0.39 2 36694317 36695004

Neighbor

gene id symbol gene type direction distance location
trnas-cga-50 NA coding upstream 6497 36687739 ~ 36687820 (+)
trnas-uga-130 NA coding upstream 6656 36687580 ~ 36687661 (+)
trnas-cga-49 NA coding upstream 7674 36686562 ~ 36686643 (+)
trnas-cga-48 NA coding upstream 9268 36684968 ~ 36685049 (+)
trnas-cga-47 NA coding upstream 10856 36683380 ~ 36683461 (+)
LOC118944833 NA coding downstream 282170 36977174 ~ 36982260 (+)
c28h7orf25 cssa03h7orf25 coding downstream 743028 37438032 ~ 37442898 (+)
LOC110509119 rala coding downstream 752735 37447739 ~ 37470801 (+)
LOC110509126 LOC106596905 coding downstream 930494 37625498 ~ 37650985 (+)
LOC110509125 LOC106596905 coding downstream 979814 37674818 ~ 37694631 (+)
G2133191 NA non-coding upstream 6789 36686955 ~ 36687528 (+)
G2133149 NA non-coding upstream 64448 36629580 ~ 36629869 (+)
G2133132 NA non-coding upstream 87138 36606925 ~ 36607179 (+)
G2132700 NA non-coding upstream 125957 36567326 ~ 36568360 (+)
G2132684 NA non-coding upstream 152904 36540406 ~ 36541413 (+)
G2133229 NA non-coding downstream 27312 36722316 ~ 36722590 (+)
G2133231 NA non-coding downstream 32113 36727117 ~ 36727418 (+)
G2133247 NA non-coding downstream 64855 36759859 ~ 36760060 (+)
G2133251 NA non-coding downstream 75410 36770414 ~ 36770618 (+)
G2133253 NA non-coding downstream 81225 36776229 ~ 36776437 (+)
LOC110509112 LOC106597339 other upstream 168902 36522754 ~ 36528580 (+)
G2132611 LOC100380659 other upstream 324350 36365556 ~ 36369967 (+)
G2132519 LOC100380659 other upstream 329323 36339094 ~ 36364994 (+)
LOC110508289 LOC106597230 other upstream 719185 35973386 ~ 35975132 (+)
G2132291 NA other upstream 994082 35699846 ~ 35700235 (+)
G2133551 NA other downstream 343649 37038653 ~ 37038924 (+)
G2134356 NA other downstream 1274099 37969103 ~ 37969465 (+)
G2134434 NA other downstream 1428392 38123396 ~ 38143819 (+)
LOC110508247 LOC106596897 other downstream 1830671 38292386 ~ 38526926 (+)
LOC118944840 LOC106596771 other downstream 2094538 38789495 ~ 39333323 (+)

Expression


Co-expression Network