Gene
RNA
| Item | Value |
|---|---|
| gene id | G2133230 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 36722315 ~ 36722568 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| NACHT, LRR and PYD domains-containing protein 3-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2439222 | True | 254 | lncRNA | 0.50 | 1 | 36722315 | 36722568 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509111 | LOC106597319 | coding | downstream | 164783 | 36526794 ~ 36557532 (-) |
| LOC110508244 | LOC106597000 | coding | downstream | 268028 | 36443223 ~ 36454287 (-) |
| abcf2a | abcf2 | coding | downstream | 285298 | 36424954 ~ 36437017 (-) |
| faim2a | LOC106597016 | coding | downstream | 302299 | 36400409 ~ 36420016 (-) |
| LOC118944889 | LOC100380659 | coding | downstream | 323556 | 36391274 ~ 36398759 (-) |
| LOC110509116 | LOC106597376 | coding | upstream | 75877 | 36798445 ~ 36958711 (-) |
| LOC118944834 | NA | coding | upstream | 277955 | 37000523 ~ 37001147 (-) |
| impa1 | impa1 | coding | upstream | 592043 | 37314611 ~ 37333488 (-) |
| fbxl7 | fbxl7 | coding | upstream | 614957 | 37337525 ~ 37470844 (-) |
| LOC110509120 | mplkip | coding | upstream | 748888 | 37471456 ~ 37473548 (-) |
| G2133224 | NA | non-coding | downstream | 5330 | 36716776 ~ 36716985 (-) |
| G2133192 | NA | non-coding | downstream | 34768 | 36685227 ~ 36687547 (-) |
| G2133165 | NA | non-coding | downstream | 66919 | 36655169 ~ 36655396 (-) |
| G2133150 | NA | non-coding | downstream | 92512 | 36629577 ~ 36629803 (-) |
| G2133144 | NA | non-coding | downstream | 98756 | 36623184 ~ 36623559 (-) |
| G2133359 | NA | non-coding | upstream | 8610 | 36731178 ~ 36731424 (-) |
| G2133361 | NA | non-coding | upstream | 9973 | 36732541 ~ 36732785 (-) |
| G2133368 | NA | non-coding | upstream | 18659 | 36741227 ~ 36741571 (-) |
| G2133370 | NA | non-coding | upstream | 19931 | 36742499 ~ 36743016 (-) |
| G2133384 | NA | non-coding | upstream | 61809 | 36784377 ~ 36784581 (-) |
| G2133007 | NA | other | downstream | 458985 | 36263002 ~ 36263330 (-) |
| G2132966 | NA | other | downstream | 472540 | 36235515 ~ 36249775 (-) |
| G2132971 | NA | other | downstream | 496936 | 36224213 ~ 36225379 (-) |
| LOC118944844 | riok1 | other | downstream | 697114 | 36023714 ~ 36025735 (-) |
| LOC110509127 | LOC106596915 | other | upstream | 1044150 | 37766370 ~ 37996222 (-) |
| G2134625 | NA | other | upstream | 1405561 | 38128129 ~ 38130407 (-) |
| G2135034 | LOC106596897 | other | upstream | 1797003 | 38519571 ~ 38526920 (-) |
| G2135837 | NA | other | upstream | 2282893 | 39005461 ~ 39006050 (-) |
| LOC110509145 | ankrd12 | other | upstream | 3081227 | 39778552 ~ 39829207 (-) |
