G2133263


Basic Information

Item Value
gene id G2133263
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 36787821 ~ 36788078 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2439255
gatcagtcagcaaaccattgctagcggtcttcagctaaccggtcatcagctaacccttagctcggaaagctctcgccagttcgaacaacgcgactctaaccagagcataacggacctatatatatatttttttatccccggattcccaccgtaAACGGAACATCTtcagctggatcttcacaactagctaactagctaaccgcaaccccggatgattactcctggctagcgtttccacccacttagcttgaagctagc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2439255 True 258 lncRNA 0.48 1 36787821 36788078

Neighbor

gene id symbol gene type direction distance location
trnas-cga-50 NA coding upstream 100001 36687739 ~ 36687820 (+)
trnas-uga-130 NA coding upstream 100160 36687580 ~ 36687661 (+)
trnas-cga-49 NA coding upstream 101178 36686562 ~ 36686643 (+)
trnas-cga-48 NA coding upstream 102772 36684968 ~ 36685049 (+)
trnas-cga-47 NA coding upstream 104360 36683380 ~ 36683461 (+)
LOC118944833 NA coding downstream 189096 36977174 ~ 36982260 (+)
c28h7orf25 cssa03h7orf25 coding downstream 649954 37438032 ~ 37442898 (+)
LOC110509119 rala coding downstream 659661 37447739 ~ 37470801 (+)
LOC110509126 LOC106596905 coding downstream 837420 37625498 ~ 37650985 (+)
LOC110509125 LOC106596905 coding downstream 886740 37674818 ~ 37694631 (+)
G2133261 NA non-coding upstream 3224 36784250 ~ 36784597 (+)
G2133258 NA non-coding upstream 6115 36781507 ~ 36781706 (+)
G2133253 NA non-coding upstream 11384 36776229 ~ 36776437 (+)
G2133251 NA non-coding upstream 17203 36770414 ~ 36770618 (+)
G2133247 NA non-coding upstream 27761 36759859 ~ 36760060 (+)
G2133264 NA non-coding downstream 124 36788202 ~ 36788688 (+)
G2133265 NA non-coding downstream 1495 36789573 ~ 36789951 (+)
G2133237 NA non-coding downstream 10448 36798526 ~ 36799575 (+)
G2133270 NA non-coding downstream 15828 36803906 ~ 36804135 (+)
G2133274 NA non-coding downstream 22158 36810236 ~ 36810692 (+)
LOC110509112 LOC106597339 other upstream 262406 36522754 ~ 36528580 (+)
G2132611 LOC100380659 other upstream 417854 36365556 ~ 36369967 (+)
G2132519 LOC100380659 other upstream 422827 36339094 ~ 36364994 (+)
LOC110508289 LOC106597230 other upstream 812689 35973386 ~ 35975132 (+)
G2132291 NA other upstream 1087586 35699846 ~ 35700235 (+)
G2133551 NA other downstream 250575 37038653 ~ 37038924 (+)
G2134356 NA other downstream 1181025 37969103 ~ 37969465 (+)
G2134434 NA other downstream 1335318 38123396 ~ 38143819 (+)
LOC110508247 LOC106596897 other downstream 1737597 38292386 ~ 38526926 (+)
LOC118944840 LOC106596771 other downstream 2001464 38789495 ~ 39333323 (+)

Expression


Co-expression Network