G2133264


Basic Information

Item Value
gene id G2133264
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 36788202 ~ 36788688 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2439256
cccaaaggctaactttctagcctttgctatctccttgcttgctaattcggcctgctaactgctagcttgtttagccccggtccgctaactgctaccttgtttagccccggtccgctaactgctaccttgtttagccccggcctactaactgttagcttgttagcacaggcctactaactgttagcttgttagcacaggcctgctaaccgtctgaatcgccgcgtcccaaacactcactggacccatatttactttcaatctcttttcgatttttaatttgtttataccttccggtaacctgcctcacccaatgtgatacggaatcgctattatttttaatttttagaacacactcaagaacctccagaagctaaccagctaactagctacaagctatttagtcattgttagccactgctagcggcttttaccttacctggataatactcgccagtccagcttccctgccccatccaccgctgccccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2439256 True 487 lncRNA 0.47 1 36788202 36788688

Neighbor

gene id symbol gene type direction distance location
trnas-cga-50 NA coding upstream 100382 36687739 ~ 36687820 (+)
trnas-uga-130 NA coding upstream 100541 36687580 ~ 36687661 (+)
trnas-cga-49 NA coding upstream 101559 36686562 ~ 36686643 (+)
trnas-cga-48 NA coding upstream 103153 36684968 ~ 36685049 (+)
trnas-cga-47 NA coding upstream 104741 36683380 ~ 36683461 (+)
LOC118944833 NA coding downstream 188486 36977174 ~ 36982260 (+)
c28h7orf25 cssa03h7orf25 coding downstream 649344 37438032 ~ 37442898 (+)
LOC110509119 rala coding downstream 659051 37447739 ~ 37470801 (+)
LOC110509126 LOC106596905 coding downstream 836810 37625498 ~ 37650985 (+)
LOC110509125 LOC106596905 coding downstream 886130 37674818 ~ 37694631 (+)
G2133263 NA non-coding upstream 124 36787821 ~ 36788078 (+)
G2133261 NA non-coding upstream 3605 36784250 ~ 36784597 (+)
G2133258 NA non-coding upstream 6496 36781507 ~ 36781706 (+)
G2133253 NA non-coding upstream 11765 36776229 ~ 36776437 (+)
G2133251 NA non-coding upstream 17584 36770414 ~ 36770618 (+)
G2133265 NA non-coding downstream 885 36789573 ~ 36789951 (+)
G2133237 NA non-coding downstream 9838 36798526 ~ 36799575 (+)
G2133270 NA non-coding downstream 15218 36803906 ~ 36804135 (+)
G2133274 NA non-coding downstream 21548 36810236 ~ 36810692 (+)
G2133279 LOC106597376 non-coding downstream 31849 36820537 ~ 36820985 (+)
LOC110509112 LOC106597339 other upstream 262787 36522754 ~ 36528580 (+)
G2132611 LOC100380659 other upstream 418235 36365556 ~ 36369967 (+)
G2132519 LOC100380659 other upstream 423208 36339094 ~ 36364994 (+)
LOC110508289 LOC106597230 other upstream 813070 35973386 ~ 35975132 (+)
G2132291 NA other upstream 1087967 35699846 ~ 35700235 (+)
G2133551 NA other downstream 249965 37038653 ~ 37038924 (+)
G2134356 NA other downstream 1180415 37969103 ~ 37969465 (+)
G2134434 NA other downstream 1334708 38123396 ~ 38143819 (+)
LOC110508247 LOC106596897 other downstream 1736987 38292386 ~ 38526926 (+)
LOC118944840 LOC106596771 other downstream 2000854 38789495 ~ 39333323 (+)

Expression


Co-expression Network