G2133270


Basic Information

Item Value
gene id G2133270
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 36803906 ~ 36804135 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2439263
CTACTTcacatgctttggcaatgttaacatatgtttcccatgccaataaagcccttaaattgaaatttaattgagagtgagagagagacagagagaagaaggcaGTCAGCATCACTATCAACAAAGGGCAGAGGACCAAGATGAGTTAATCATGATtagacaaagaaaaaacagagcCATCGCAATTCTGTCCAGGACCATTGTGGAGTACAGAGGTGTTCCTTCAGAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2439263 True 230 lncRNA 0.40 1 36803906 36804135

Neighbor

gene id symbol gene type direction distance location
trnas-cga-50 NA coding upstream 116086 36687739 ~ 36687820 (+)
trnas-uga-130 NA coding upstream 116245 36687580 ~ 36687661 (+)
trnas-cga-49 NA coding upstream 117263 36686562 ~ 36686643 (+)
trnas-cga-48 NA coding upstream 118857 36684968 ~ 36685049 (+)
trnas-cga-47 NA coding upstream 120445 36683380 ~ 36683461 (+)
LOC118944833 NA coding downstream 173039 36977174 ~ 36982260 (+)
c28h7orf25 cssa03h7orf25 coding downstream 633897 37438032 ~ 37442898 (+)
LOC110509119 rala coding downstream 643604 37447739 ~ 37470801 (+)
LOC110509126 LOC106596905 coding downstream 821363 37625498 ~ 37650985 (+)
LOC110509125 LOC106596905 coding downstream 870683 37674818 ~ 37694631 (+)
G2133237 NA non-coding upstream 4331 36798526 ~ 36799575 (+)
G2133265 NA non-coding upstream 13955 36789573 ~ 36789951 (+)
G2133264 NA non-coding upstream 15218 36788202 ~ 36788688 (+)
G2133263 NA non-coding upstream 15828 36787821 ~ 36788078 (+)
G2133261 NA non-coding upstream 19309 36784250 ~ 36784597 (+)
G2133274 NA non-coding downstream 6101 36810236 ~ 36810692 (+)
G2133279 LOC106597376 non-coding downstream 16402 36820537 ~ 36820985 (+)
G2133286 NA non-coding downstream 28056 36832191 ~ 36832501 (+)
G2133289 NA non-coding downstream 40741 36844876 ~ 36845194 (+)
G2133290 NA non-coding downstream 41760 36845895 ~ 36846096 (+)
LOC110509112 LOC106597339 other upstream 278491 36522754 ~ 36528580 (+)
G2132611 LOC100380659 other upstream 433939 36365556 ~ 36369967 (+)
G2132519 LOC100380659 other upstream 438912 36339094 ~ 36364994 (+)
LOC110508289 LOC106597230 other upstream 828774 35973386 ~ 35975132 (+)
G2132291 NA other upstream 1103671 35699846 ~ 35700235 (+)
G2133551 NA other downstream 234518 37038653 ~ 37038924 (+)
G2134356 NA other downstream 1164968 37969103 ~ 37969465 (+)
G2134434 NA other downstream 1319261 38123396 ~ 38143819 (+)
LOC110508247 LOC106596897 other downstream 1721540 38292386 ~ 38526926 (+)
LOC118944840 LOC106596771 other downstream 1985407 38789495 ~ 39333323 (+)

Expression


Co-expression Network