G2133413



Basic Information


Item Value
gene id G2133413
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 36826378 ~ 36831372 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2439430
gtgtcttgtctctgtcctttcccttcaccctgtctccctctgctggtcgttgttaggttaccttttctcccccgctttcccccagctgttccttgtctcctctaactacccattcaccccgtttcccacctgttccctttttccctctgattaggtccctatatctctctctgtttctgttcctgtccttgtcggattcttgtttgttgtgtttcatgcctgagccagactatcgtcatgtttgctgtaaccttgtcttgtcctgtcggaatctgccggtctatctgagcctacctatgtttggttattaaagaagctctgtttaagttagttcg

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2439430 True 335 lncRNA 0.48 2 36826378 36831372

Neighbor


gene id symbol gene type direction distance location
LOC110509111 LOC106597319 coding downstream 268846 36526794 ~ 36557532 (-)
LOC110508244 LOC106597000 coding downstream 372091 36443223 ~ 36454287 (-)
abcf2a abcf2 coding downstream 389361 36424954 ~ 36437017 (-)
faim2a LOC106597016 coding downstream 406362 36400409 ~ 36420016 (-)
LOC118944889 LOC100380659 coding downstream 427619 36391274 ~ 36398759 (-)
LOC118944834 NA coding upstream 169151 37000523 ~ 37001147 (-)
impa1 impa1 coding upstream 483239 37314611 ~ 37333488 (-)
fbxl7 fbxl7 coding upstream 506153 37337525 ~ 37470844 (-)
LOC110509120 mplkip coding upstream 640084 37471456 ~ 37473548 (-)
inhbab inhba coding upstream 715440 37546812 ~ 37561210 (-)
G2133407 NA non-coding downstream 6127 36820026 ~ 36820251 (-)
G2133406 NA non-coding downstream 6395 36818002 ~ 36819983 (-)
G2133405 NA non-coding downstream 9552 36816624 ~ 36816826 (-)
G2133401 NA non-coding downstream 12552 36813579 ~ 36813826 (-)
G2133399 NA non-coding downstream 14340 36811828 ~ 36812038 (-)
G2133416 NA non-coding upstream 8401 36839773 ~ 36840583 (-)
G2133417 NA non-coding upstream 9276 36840648 ~ 36841111 (-)
G2133419 NA non-coding upstream 13478 36844850 ~ 36845233 (-)
G2133424 NA non-coding upstream 25463 36856835 ~ 36857045 (-)
G2133428 NA non-coding upstream 33820 36865192 ~ 36865427 (-)
G2133007 NA other downstream 563048 36263002 ~ 36263330 (-)
G2132966 NA other downstream 576603 36235515 ~ 36249775 (-)
G2132971 NA other downstream 600999 36224213 ~ 36225379 (-)
LOC118944844 riok1 other downstream 801177 36023714 ~ 36025735 (-)
LOC110509127 LOC106596915 other upstream 935346 37766370 ~ 37996222 (-)
G2134625 NA other upstream 1296757 38128129 ~ 38130407 (-)
G2135034 LOC106596897 other upstream 1688199 38519571 ~ 38526920 (-)
G2135837 NA other upstream 2174089 39005461 ~ 39006050 (-)
LOC110509145 ankrd12 other upstream 2972423 39778552 ~ 39829207 (-)

Expression



Co-expression Network