G2133289


Basic Information

Item Value
gene id G2133289
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 36844876 ~ 36845194 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2439282
tacaccgctacatggtaaaacagtagtgtgtagttccaacagttagctacaccgctacatggtaaaacagtagtgtgtagttccagtagttagctacaccgctacatggtaaaacagtagtgtgtagttccaatagttagctacaccgctacatggtaaaacagtagtgtgtagttccagtagttagctacaccgctacatggtaaaacagtagtgtgtagttccagtagttagctacaccgctacatggtaaaacagtagtgtgtagttccaatagttagctacaccgctacatggtaaaacagtagtgtgtagttcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2439282 True 319 lncRNA 0.42 1 36844876 36845194

Neighbor

gene id symbol gene type direction distance location
trnas-cga-50 NA coding upstream 157056 36687739 ~ 36687820 (+)
trnas-uga-130 NA coding upstream 157215 36687580 ~ 36687661 (+)
trnas-cga-49 NA coding upstream 158233 36686562 ~ 36686643 (+)
trnas-cga-48 NA coding upstream 159827 36684968 ~ 36685049 (+)
trnas-cga-47 NA coding upstream 161415 36683380 ~ 36683461 (+)
LOC118944833 NA coding downstream 131980 36977174 ~ 36982260 (+)
c28h7orf25 cssa03h7orf25 coding downstream 592838 37438032 ~ 37442898 (+)
LOC110509119 rala coding downstream 602545 37447739 ~ 37470801 (+)
LOC110509126 LOC106596905 coding downstream 780304 37625498 ~ 37650985 (+)
LOC110509125 LOC106596905 coding downstream 829624 37674818 ~ 37694631 (+)
G2133286 NA non-coding upstream 12375 36832191 ~ 36832501 (+)
G2133279 LOC106597376 non-coding upstream 23891 36820537 ~ 36820985 (+)
G2133274 NA non-coding upstream 34184 36810236 ~ 36810692 (+)
G2133270 NA non-coding upstream 40741 36803906 ~ 36804135 (+)
G2133237 NA non-coding upstream 45301 36798526 ~ 36799575 (+)
G2133290 NA non-coding downstream 701 36845895 ~ 36846096 (+)
G2133291 NA non-coding downstream 2176 36847370 ~ 36847731 (+)
G2133293 NA non-coding downstream 5030 36850224 ~ 36850597 (+)
G2133297 NA non-coding downstream 15124 36860318 ~ 36860747 (+)
G2133298 NA non-coding downstream 15640 36860834 ~ 36861074 (+)
LOC110509112 LOC106597339 other upstream 319461 36522754 ~ 36528580 (+)
G2132611 LOC100380659 other upstream 474909 36365556 ~ 36369967 (+)
G2132519 LOC100380659 other upstream 479882 36339094 ~ 36364994 (+)
LOC110508289 LOC106597230 other upstream 869744 35973386 ~ 35975132 (+)
G2132291 NA other upstream 1144641 35699846 ~ 35700235 (+)
G2133551 NA other downstream 193459 37038653 ~ 37038924 (+)
G2134356 NA other downstream 1123909 37969103 ~ 37969465 (+)
G2134434 NA other downstream 1278202 38123396 ~ 38143819 (+)
LOC110508247 LOC106596897 other downstream 1680481 38292386 ~ 38526926 (+)
LOC118944840 LOC106596771 other downstream 1944348 38789495 ~ 39333323 (+)

Expression


Co-expression Network