G2133293


Basic Information

Item Value
gene id G2133293
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 36850224 ~ 36850597 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2439288
GTCTattagtattcaacccctttgttacggcgagcctaaataagttcaggagtagatatttgcttaacaagtcacataatatgttgcgtggactcactctgtgtgcaataatagtgtttaacgtgattttttgaatgactacctcatctctgtaccccacacatacaattatctgtaaggtcactcagccgagcagtgaatttcaaacactcaGCCACAAAGACCAGGTTACGTTAAGgtgttccaatgcctcgcaaagaagtgcacctattggtagatgggtaaaaaacaaacaaaaaaaaaacagacattgaatatccctttgagcttgatgaagttattcattacactttggatggtgtatcaatacaccc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2439288 True 374 lncRNA 0.39 1 36850224 36850597

Neighbor

gene id symbol gene type direction distance location
trnas-cga-50 NA coding upstream 162404 36687739 ~ 36687820 (+)
trnas-uga-130 NA coding upstream 162563 36687580 ~ 36687661 (+)
trnas-cga-49 NA coding upstream 163581 36686562 ~ 36686643 (+)
trnas-cga-48 NA coding upstream 165175 36684968 ~ 36685049 (+)
trnas-cga-47 NA coding upstream 166763 36683380 ~ 36683461 (+)
LOC118944833 NA coding downstream 126577 36977174 ~ 36982260 (+)
c28h7orf25 cssa03h7orf25 coding downstream 587435 37438032 ~ 37442898 (+)
LOC110509119 rala coding downstream 597142 37447739 ~ 37470801 (+)
LOC110509126 LOC106596905 coding downstream 774901 37625498 ~ 37650985 (+)
LOC110509125 LOC106596905 coding downstream 824221 37674818 ~ 37694631 (+)
G2133291 NA non-coding upstream 2493 36847370 ~ 36847731 (+)
G2133290 NA non-coding upstream 4128 36845895 ~ 36846096 (+)
G2133289 NA non-coding upstream 5030 36844876 ~ 36845194 (+)
G2133286 NA non-coding upstream 17723 36832191 ~ 36832501 (+)
G2133279 LOC106597376 non-coding upstream 29239 36820537 ~ 36820985 (+)
G2133297 NA non-coding downstream 9721 36860318 ~ 36860747 (+)
G2133298 NA non-coding downstream 10237 36860834 ~ 36861074 (+)
G2133299 LOC106597376 non-coding downstream 11537 36862134 ~ 36862412 (+)
G2133305 NA non-coding downstream 23316 36873913 ~ 36874376 (+)
G2133306 NA non-coding downstream 24685 36875282 ~ 36875643 (+)
LOC110509112 LOC106597339 other upstream 324809 36522754 ~ 36528580 (+)
G2132611 LOC100380659 other upstream 480257 36365556 ~ 36369967 (+)
G2132519 LOC100380659 other upstream 485230 36339094 ~ 36364994 (+)
LOC110508289 LOC106597230 other upstream 875092 35973386 ~ 35975132 (+)
G2132291 NA other upstream 1149989 35699846 ~ 35700235 (+)
G2133551 NA other downstream 188056 37038653 ~ 37038924 (+)
G2134356 NA other downstream 1118506 37969103 ~ 37969465 (+)
G2134434 NA other downstream 1272799 38123396 ~ 38143819 (+)
LOC110508247 LOC106596897 other downstream 1675078 38292386 ~ 38526926 (+)
LOC118944840 LOC106596771 other downstream 1938945 38789495 ~ 39333323 (+)

Expression


Co-expression Network