G2133305


Basic Information

Item Value
gene id G2133305
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 36873913 ~ 36874376 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2439300
gGACtcctgctctggattactgacctctggcTGCcctttgacctgtcatttgcctgccccctgttttttgtaataaacttttgtcacttcgaactgtctgcatgtgggtcttatcctgaggtctgataGTACCTTTTGCAGAGTGATGAGGCCCTCCTGTGTGTCTGGGTCGGGGGTGATTCGGAACAGTCCCAGGCCGTCCCCATCCACGATCCTGTATTCCATCTCAGCATTGGGTCCCACATCTGAGTCTAGTGCCTTTATCTTGGCTACCGTCGTGGCCACCGGCAGGGACTCGGGCACGCTGAACTGATAGCTCTctacagacgagagagagacagacagagggatagacagagggacagacagagggacagagagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagaca

Function

NR:

description
PREDICTED: cadherin-7-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2439300 True 464 lncRNA 0.53 1 36873913 36874376

Neighbor

gene id symbol gene type direction distance location
trnas-cga-50 NA coding upstream 186093 36687739 ~ 36687820 (+)
trnas-uga-130 NA coding upstream 186252 36687580 ~ 36687661 (+)
trnas-cga-49 NA coding upstream 187270 36686562 ~ 36686643 (+)
trnas-cga-48 NA coding upstream 188864 36684968 ~ 36685049 (+)
trnas-cga-47 NA coding upstream 190452 36683380 ~ 36683461 (+)
LOC118944833 NA coding downstream 102798 36977174 ~ 36982260 (+)
c28h7orf25 cssa03h7orf25 coding downstream 563656 37438032 ~ 37442898 (+)
LOC110509119 rala coding downstream 573363 37447739 ~ 37470801 (+)
LOC110509126 LOC106596905 coding downstream 751122 37625498 ~ 37650985 (+)
LOC110509125 LOC106596905 coding downstream 800442 37674818 ~ 37694631 (+)
G2133299 LOC106597376 non-coding upstream 11501 36862134 ~ 36862412 (+)
G2133298 NA non-coding upstream 12839 36860834 ~ 36861074 (+)
G2133297 NA non-coding upstream 13166 36860318 ~ 36860747 (+)
G2133293 NA non-coding upstream 23316 36850224 ~ 36850597 (+)
G2133291 NA non-coding upstream 26182 36847370 ~ 36847731 (+)
G2133306 NA non-coding downstream 906 36875282 ~ 36875643 (+)
G2133308 NA non-coding downstream 5209 36879585 ~ 36879941 (+)
G2133310 NA non-coding downstream 6771 36881147 ~ 36881439 (+)
G2133315 NA non-coding downstream 12058 36886434 ~ 36886825 (+)
G2133317 NA non-coding downstream 14861 36889237 ~ 36889719 (+)
LOC110509112 LOC106597339 other upstream 348498 36522754 ~ 36528580 (+)
G2132611 LOC100380659 other upstream 503946 36365556 ~ 36369967 (+)
G2132519 LOC100380659 other upstream 508919 36339094 ~ 36364994 (+)
LOC110508289 LOC106597230 other upstream 898781 35973386 ~ 35975132 (+)
G2132291 NA other upstream 1173678 35699846 ~ 35700235 (+)
G2133551 NA other downstream 164277 37038653 ~ 37038924 (+)
G2134356 NA other downstream 1094727 37969103 ~ 37969465 (+)
G2134434 NA other downstream 1249020 38123396 ~ 38143819 (+)
LOC110508247 LOC106596897 other downstream 1651299 38292386 ~ 38526926 (+)
LOC118944840 LOC106596771 other downstream 1915166 38789495 ~ 39333323 (+)

Expression


Co-expression Network