G2133322


Basic Information

Item Value
gene id G2133322
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 36894508 ~ 36900833 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2439325
ataggatgctatgttcctcagttcaggatctatccctttaggatgctctgttcctaatgttcctcagttcaggatctatccctataggatgctctgttcctcagttcaggatctatccctataggatgctctgttcctcagttcaggatctatccctataggatgctctgttcctcagttcaggatctatccctataggatgctctgttcctcagttcaggatctatccctataggatgctctgttgctcagttcaggatctatccctttaggatgctctgttcctcagttcaggatctatccctataggatgctctgttcctcagttcaggatctatccctataggatgctctgttcctcagttcaggatctatccctataagatgctctgttcctcagttcaggatctatccctataggatgctctgttcctcagttcaggatctatccctataggatgctctgttcctcagttcaggatctatccctatagg
>TU2439328
gttcctcagttcaggatctatccctataggatgctctgttcctcagttcaggatctatccctataggatgctctgttcctcagttcaggatctatccctataggatgctATgatgctctgttcctcagttcaggatctatccctacaggatgctctgttcctcagttcaggatctatccctataggatgctctgttcctcagttcaggatatatccctataggatgctctgttcctcagttcaggatctatccctataggatgctTTGTTCCTCAGTAcaggatctatccctataggatgctatgtttctctgttcctcagttcaggatcTATCCCTACaggatgctctgttcctcagttcaggatctatccctataggatgctctgttcctcagttcaggatctatccctataggatgctctgttcctcagttcaggatctatccccATAGGATGCTttgttcctcagttcaggatctatccctataggatgctatgtttctctgttcctcagttcaggatctatccctataggatgctATGTTTCTCTattcctcagttcaggatctatccctataggatgctatgttcctcagttcaggatctatccctataggatgcCCTGTTCCTCAGTTCAGAATttatccctataggatgctctgttcctcagttcaggatctatccctataggatgctctgttcctcagttcaggatccATCCCTATAGGATGCTATGTTtctctgttcctcagttcaggatctatcGCTATAGGATGCTatgttcctcagttcaggatctatcccgTTAGGATGCTATGTTTCTCTtttcctcagttcaggatctatccctataggatgctctgttcctcagttcaggatctatccctataggatgctctgttgctcagttcaggatctatccctttaggatgctctgttcctcagttcaggatctatccctataggatgctctgttcctcagttcaggatctatccctataggatgcCCTGTTCCTCAGTTCAGAATTTATCCCTATAGGATGCTCTGTTCCTCAAttcaggatctatccctataggatgctATGTCACTCAGTTCAGTACACTATcggtctaaagtttggacacacctactcattcaagggtttttctttattttgactattttctacattatagaataatag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2439325 False 495 lncRNA 0.45 2 36894508 36897188
TU2439328 True 1184 lncRNA 0.44 4 36896048 36900833
Loading

Neighbor

gene id symbol gene type direction distance location
trnas-cga-50 NA coding upstream 206688 36687739 ~ 36687820 (+)
trnas-uga-130 NA coding upstream 206847 36687580 ~ 36687661 (+)
trnas-cga-49 NA coding upstream 207865 36686562 ~ 36686643 (+)
trnas-cga-48 NA coding upstream 209459 36684968 ~ 36685049 (+)
trnas-cga-47 NA coding upstream 211047 36683380 ~ 36683461 (+)
LOC118944833 NA coding downstream 76341 36977174 ~ 36982260 (+)
c28h7orf25 cssa03h7orf25 coding downstream 537199 37438032 ~ 37442898 (+)
LOC110509119 rala coding downstream 546906 37447739 ~ 37470801 (+)
LOC110509126 LOC106596905 coding downstream 724665 37625498 ~ 37650985 (+)
LOC110509125 LOC106596905 coding downstream 773985 37674818 ~ 37694631 (+)
G2133317 NA non-coding upstream 4789 36889237 ~ 36889719 (+)
G2133315 NA non-coding upstream 7683 36886434 ~ 36886825 (+)
G2133310 NA non-coding upstream 13069 36881147 ~ 36881439 (+)
G2133308 NA non-coding upstream 14567 36879585 ~ 36879941 (+)
G2133306 NA non-coding upstream 18865 36875282 ~ 36875643 (+)
G2133323 NA non-coding downstream 236 36901069 ~ 36901292 (+)
G2133326 NA non-coding downstream 4148 36904981 ~ 36905272 (+)
G2133328 NA non-coding downstream 6837 36907670 ~ 36907937 (+)
G2133329 NA non-coding downstream 11020 36911853 ~ 36916700 (+)
G2133334 NA non-coding downstream 26026 36926859 ~ 36961793 (+)
LOC110509112 LOC106597339 other upstream 369093 36522754 ~ 36528580 (+)
G2132611 LOC100380659 other upstream 524541 36365556 ~ 36369967 (+)
G2132519 LOC100380659 other upstream 529514 36339094 ~ 36364994 (+)
LOC110508289 LOC106597230 other upstream 919376 35973386 ~ 35975132 (+)
G2132291 NA other upstream 1194273 35699846 ~ 35700235 (+)
G2133551 NA other downstream 137820 37038653 ~ 37038924 (+)
G2134356 NA other downstream 1068270 37969103 ~ 37969465 (+)
G2134434 NA other downstream 1222563 38123396 ~ 38143819 (+)
LOC110508247 LOC106596897 other downstream 1624842 38292386 ~ 38526926 (+)
LOC118944840 LOC106596771 other downstream 1888709 38789495 ~ 39333323 (+)

Expression

G2133322 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 8.
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G2133322 Expression in each Bioproject

Bar chart with 8 bars.
G2133322 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 175.
End of interactive chart.

Co-expression Network