G2134223


Basic Information

Item Value
gene id G2134223
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 37712630 ~ 37713038 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2440354
atttcgggacaggtcgaaaagcataaAAAAACGTATggcattttagctagctagcttgctgtagCTAGCTAATTTCTCATGGGATATAAactttgggttgttattttacctgaaatgagcaaggtcctctactccgacaatgaatccacagataaaagggtaaaccgagttagtttctagtaatctctcctccttcaggcttcttcttcttctgtggactttatatggcggttggcaaccaactttaaggtgcattaccaccaccaactggactggagtgtgtggacctcagttcatctttcaatcacccacgtgggtatatgctcctaacaaccaatgaggagatggaaggggcgggacttgcagcgcatcaagcctcacaaatagaaccaagttctattttatcACC

Function

NR:

description
PREDICTED: uncharacterized protein LOC106576161 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2440354 True 409 lncRNA 0.44 1 37712630 37713038

Neighbor

gene id symbol gene type direction distance location
LOC110509125 LOC106596905 coding upstream 17999 37674818 ~ 37694631 (+)
LOC110509126 LOC106596905 coding upstream 61645 37625498 ~ 37650985 (+)
LOC110509119 rala coding upstream 241829 37447739 ~ 37470801 (+)
c28h7orf25 cssa03h7orf25 coding upstream 269732 37438032 ~ 37442898 (+)
LOC118944833 NA coding upstream 730370 36977174 ~ 36982260 (+)
LOC110509128 LOC100136478 coding downstream 498238 38211276 ~ 38229238 (+)
LOC110508247 LOC106596897 coding downstream 579348 38292386 ~ 38526926 (+)
LOC110509131 LOC106596891 coding downstream 821519 38534557 ~ 38549486 (+)
LOC118944835 NA coding downstream 1035978 38749016 ~ 38756005 (+)
LOC118944840 LOC106596771 coding downstream 1076457 38789495 ~ 39333323 (+)
G2134079 NA non-coding upstream 26791 37587808 ~ 37685839 (+)
G2134086 NA non-coding upstream 113101 37596641 ~ 37599529 (+)
G2134075 LOC106569812 non-coding upstream 123536 37588343 ~ 37589094 (+)
G2134073 NA non-coding upstream 127935 37579169 ~ 37584695 (+)
G2134066 NA non-coding upstream 139353 37572862 ~ 37573277 (+)
G2134230 NA non-coding downstream 7629 37720667 ~ 37720892 (+)
G2134242 NA non-coding downstream 27713 37740751 ~ 37740979 (+)
G2134243 NA non-coding downstream 29639 37742677 ~ 37742955 (+)
G2134259 NA non-coding downstream 46327 37759365 ~ 37759567 (+)
G2134263 NA non-coding downstream 56574 37769612 ~ 37837344 (+)
G2133551 NA other upstream 673706 37038653 ~ 37038924 (+)
LOC110509112 LOC106597339 other upstream 1187215 36522754 ~ 36528580 (+)
G2132611 LOC100380659 other upstream 1342663 36365556 ~ 36369967 (+)
G2132519 LOC100380659 other upstream 1347636 36339094 ~ 36364994 (+)
LOC110508289 LOC106597230 other upstream 1737498 35973386 ~ 35975132 (+)
G2134356 NA other downstream 256065 37969103 ~ 37969465 (+)
G2134434 NA other downstream 410358 38123396 ~ 38143819 (+)
G2135186 NA other downstream 1134442 38847480 ~ 38848317 (+)

Expression


Co-expression Network