G2134288


Basic Information

Item Value
gene id G2134288
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 37840562 ~ 37840953 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2440450
GTAGGTATAACGCTGGTAGGTATAACACTGGTAGGTATAACACTGGTAGGTATAACACTGGTAGGTATAAcgctggtaggtaggtagGTATAACACTGGTAGGTATAACACTGGTAGGTATAACGCTGGTAGGTATAACGCTGGTAGGTATAATGCTGATTTAACAGCTCCAATGCAATTACACCTCTCCACATCACCTAAATAAGAACAATCAAACTGCAATGCAG
>TU2440451
GTAGGTATAACGCTGGTAGGTATAACACTGGTAGGTATAACACTGGTAGGTATAACGCTGGTAGGTATAACGCTGGTAGGTATAACACTGGTAGGTATAACACTGGTAGGTATAACGCTGGTAGGTATAACGCTGGTAGGTATAACACTGGTAGGTATAACACTGGTAGGTATAACGCTGGTAGGTATAACGCTGGTAGGTATAATGCTGATTTAACAGCTCCAATGCAATTACACCTCTCCACATCACCTAAATAAGAACAATCAAACTGCAATGCAG

Function

NR:

description
Hypothetical protein in mobD 3'region

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2440450 False 227 lncRNA 0.41 3 37840562 37840953
TU2440451 True 279 lncRNA 0.42 2 37840562 37840953

Neighbor

gene id symbol gene type direction distance location
LOC110509125 LOC106596905 coding upstream 145931 37674818 ~ 37694631 (+)
LOC110509126 LOC106596905 coding upstream 189577 37625498 ~ 37650985 (+)
LOC110509119 rala coding upstream 369761 37447739 ~ 37470801 (+)
c28h7orf25 cssa03h7orf25 coding upstream 397664 37438032 ~ 37442898 (+)
LOC118944833 NA coding upstream 858302 36977174 ~ 36982260 (+)
LOC110509128 LOC100136478 coding downstream 370323 38211276 ~ 38229238 (+)
LOC110508247 LOC106596897 coding downstream 451433 38292386 ~ 38526926 (+)
LOC110509131 LOC106596891 coding downstream 693604 38534557 ~ 38549486 (+)
LOC118944835 NA coding downstream 908063 38749016 ~ 38756005 (+)
LOC118944840 LOC106596771 coding downstream 948542 38789495 ~ 39333323 (+)
G2134263 NA non-coding upstream 3218 37769612 ~ 37837344 (+)
G2134259 NA non-coding upstream 80995 37759365 ~ 37759567 (+)
G2134243 NA non-coding upstream 97607 37742677 ~ 37742955 (+)
G2134242 NA non-coding upstream 99583 37740751 ~ 37740979 (+)
G2134230 NA non-coding upstream 119670 37720667 ~ 37720892 (+)
G2134290 NA non-coding downstream 3914 37844867 ~ 37857677 (+)
G2134291 NA non-coding downstream 15281 37856234 ~ 37857451 (+)
G2134326 NA non-coding downstream 71210 37912163 ~ 37912662 (+)
G2134334 NA non-coding downstream 87483 37928436 ~ 37929483 (+)
G2134445 NA non-coding downstream 303248 38144201 ~ 38144424 (+)
G2133551 NA other upstream 801638 37038653 ~ 37038924 (+)
LOC110509112 LOC106597339 other upstream 1315147 36522754 ~ 36528580 (+)
G2132611 LOC100380659 other upstream 1470595 36365556 ~ 36369967 (+)
G2132519 LOC100380659 other upstream 1475568 36339094 ~ 36364994 (+)
LOC110508289 LOC106597230 other upstream 1865430 35973386 ~ 35975132 (+)
G2134356 NA other downstream 128150 37969103 ~ 37969465 (+)
G2134434 NA other downstream 282443 38123396 ~ 38143819 (+)
G2135186 NA other downstream 1006527 38847480 ~ 38848317 (+)

Expression


Co-expression Network