Gene
RNA
| Item | Value |
|---|---|
| gene id | G2134290 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 37844867 ~ 37857677 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2440455 | False | 293 | lncRNA | 0.31 | 3 | 37844867 | 37857677 |
| TU2440454 | True | 250 | lncRNA | 0.30 | 2 | 37854767 | 37857677 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509125 | LOC106596905 | coding | upstream | 150236 | 37674818 ~ 37694631 (+) |
| LOC110509126 | LOC106596905 | coding | upstream | 193882 | 37625498 ~ 37650985 (+) |
| LOC110509119 | rala | coding | upstream | 374066 | 37447739 ~ 37470801 (+) |
| c28h7orf25 | cssa03h7orf25 | coding | upstream | 401969 | 37438032 ~ 37442898 (+) |
| LOC118944833 | NA | coding | upstream | 862607 | 36977174 ~ 36982260 (+) |
| LOC110509128 | LOC100136478 | coding | downstream | 353599 | 38211276 ~ 38229238 (+) |
| LOC110508247 | LOC106596897 | coding | downstream | 434709 | 38292386 ~ 38526926 (+) |
| LOC110509131 | LOC106596891 | coding | downstream | 676880 | 38534557 ~ 38549486 (+) |
| LOC118944835 | NA | coding | downstream | 891339 | 38749016 ~ 38756005 (+) |
| LOC118944840 | LOC106596771 | coding | downstream | 931818 | 38789495 ~ 39333323 (+) |
| G2134288 | NA | non-coding | upstream | 3914 | 37840562 ~ 37840953 (+) |
| G2134263 | NA | non-coding | upstream | 7523 | 37769612 ~ 37837344 (+) |
| G2134259 | NA | non-coding | upstream | 85300 | 37759365 ~ 37759567 (+) |
| G2134243 | NA | non-coding | upstream | 101912 | 37742677 ~ 37742955 (+) |
| G2134242 | NA | non-coding | upstream | 103888 | 37740751 ~ 37740979 (+) |
| G2134326 | NA | non-coding | downstream | 54486 | 37912163 ~ 37912662 (+) |
| G2134334 | NA | non-coding | downstream | 70759 | 37928436 ~ 37929483 (+) |
| G2134445 | NA | non-coding | downstream | 286524 | 38144201 ~ 38144424 (+) |
| G2134450 | NA | non-coding | downstream | 290294 | 38147971 ~ 38148270 (+) |
| G2134451 | NA | non-coding | downstream | 291188 | 38148865 ~ 38149087 (+) |
| G2133551 | NA | other | upstream | 805943 | 37038653 ~ 37038924 (+) |
| LOC110509112 | LOC106597339 | other | upstream | 1319452 | 36522754 ~ 36528580 (+) |
| G2132611 | LOC100380659 | other | upstream | 1474900 | 36365556 ~ 36369967 (+) |
| G2132519 | LOC100380659 | other | upstream | 1479873 | 36339094 ~ 36364994 (+) |
| LOC110508289 | LOC106597230 | other | upstream | 1869735 | 35973386 ~ 35975132 (+) |
| G2134356 | NA | other | downstream | 111426 | 37969103 ~ 37969465 (+) |
| G2134434 | NA | other | downstream | 265719 | 38123396 ~ 38143819 (+) |
| G2135186 | NA | other | downstream | 989803 | 38847480 ~ 38848317 (+) |
