Gene
RNA
| Item | Value |
|---|---|
| gene id | G2134503 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 37875312 ~ 37883306 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| syntaxin-binding protein 4-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2440699 | True | 426 | lncRNA | 0.35 | 2 | 37875312 | 37883306 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509123 | LOC106596905 | coding | downstream | 270432 | 37578708 ~ 37645494 (-) |
| inhbab | inhba | coding | downstream | 314102 | 37546812 ~ 37561210 (-) |
| LOC110509120 | mplkip | coding | downstream | 401764 | 37471456 ~ 37473548 (-) |
| fbxl7 | fbxl7 | coding | downstream | 404468 | 37337525 ~ 37470844 (-) |
| impa1 | impa1 | coding | downstream | 541824 | 37314611 ~ 37333488 (-) |
| LOC110509132 | LOC106596853 | coding | upstream | 691411 | 38574717 ~ 38644750 (-) |
| LOC110509133 | LOC106592421 | coding | upstream | 774498 | 38657804 ~ 38673221 (-) |
| LOC118944870 | LOC106596806 | coding | upstream | 801969 | 38685275 ~ 38702608 (-) |
| LOC110509137 | LOC105025287 | coding | upstream | 1694911 | 39577116 ~ 39621092 (-) |
| LOC118944811 | NA | coding | upstream | 1696388 | 39579694 ~ 39582551 (-) |
| G2134496 | NA | non-coding | downstream | 13929 | 37860328 ~ 37861383 (-) |
| G2134492 | NA | non-coding | downstream | 16747 | 37855825 ~ 37858565 (-) |
| G2134490 | NA | non-coding | downstream | 20935 | 37850298 ~ 37854377 (-) |
| G2134489 | NA | non-coding | downstream | 28255 | 37842639 ~ 37847057 (-) |
| G2134486 | NA | non-coding | downstream | 38085 | 37803024 ~ 37837227 (-) |
| G2134522 | NA | non-coding | upstream | 27708 | 37911014 ~ 37941146 (-) |
| G2134546 | NA | non-coding | upstream | 86809 | 37970115 ~ 37970347 (-) |
| G2134548 | NA | non-coding | upstream | 88121 | 37971427 ~ 37971633 (-) |
| G2134578 | NA | non-coding | upstream | 148117 | 38031423 ~ 38032037 (-) |
| G2134582 | NA | non-coding | upstream | 152676 | 38035982 ~ 38083851 (-) |
| LOC110509111 | LOC106597319 | other | downstream | 1317859 | 36526794 ~ 36557532 (-) |
| G2133007 | NA | other | downstream | 1611982 | 36263002 ~ 36263330 (-) |
| G2132966 | NA | other | downstream | 1625537 | 36235515 ~ 36249775 (-) |
| G2132971 | NA | other | downstream | 1649933 | 36224213 ~ 36225379 (-) |
| LOC118944844 | riok1 | other | downstream | 1850111 | 36023714 ~ 36025735 (-) |
| G2134625 | NA | other | upstream | 244823 | 38128129 ~ 38130407 (-) |
| G2135034 | LOC106596897 | other | upstream | 636265 | 38519571 ~ 38526920 (-) |
| G2135837 | NA | other | upstream | 1122155 | 39005461 ~ 39006050 (-) |
| LOC110509145 | ankrd12 | other | upstream | 1920489 | 39778552 ~ 39829207 (-) |
| G2136189 | NA | other | upstream | 2059847 | 39943153 ~ 39945834 (-) |
